(29 nodes) PAZ domain network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0I9G1	Uncharacterized protein; Belongs to the argonaute family. (1058 aa)
	A0A0R0JXM9	Uncharacterized protein. (831 aa)
	I1JB56_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (972 aa)
	I1JIR2_SOYBN	Uncharacterized protein. (906 aa)
	GMDCL2A	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1414 aa)
	I1LDY9_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (974 aa)
	I1LRB1_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (961 aa)
	I1M7A2_SOYBN	Uncharacterized protein. (906 aa)
	I1MQL3_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (1053 aa)
	I1MUE1_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (903 aa)
	I1NCK3_SOYBN	Uncharacterized protein. (788 aa)
	I1NDG2_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (966 aa)
	I1NGL2_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (974 aa)
	K7K1Y3_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (1029 aa)
	K7K7Q1_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (1031 aa)
	K7KH72_SOYBN	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1947 aa)
	GMDCL3A	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1674 aa)
	K7KK31_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (909 aa)
	K7KNI8_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (908 aa)
	K7KWE6_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (909 aa)
	GMDCL2B	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1421 aa)
	K7LGP6_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (949 aa)
	AGO5	Uncharacterized protein; Belongs to the argonaute family. (890 aa)
	K7M014_SOYBN	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1637 aa)
	K7M0M5_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (913 aa)
	K7MB18_SOYBN	Uncharacterized protein; Belongs to the argonaute family. (1037 aa)
	K7MKZ2_SOYBN	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1636 aa)
	K7N0F5_SOYBN	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1945 aa)
	K7N1Q0_SOYBN	Uncharacterized protein. (947 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0I9G1	GMDCL2A	A0A0R0I9G1	I1L0G0	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.541
A0A0R0I9G1	GMDCL2B	A0A0R0I9G1	K7LBG6	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.541
A0A0R0I9G1	GMDCL3A	A0A0R0I9G1	K7KIB7	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.568
A0A0R0I9G1	I1NCK3_SOYBN	A0A0R0I9G1	I1NCK3	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.541
A0A0R0I9G1	K7KH72_SOYBN	A0A0R0I9G1	K7KH72	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.606
A0A0R0I9G1	K7M014_SOYBN	A0A0R0I9G1	K7M014	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.531
A0A0R0I9G1	K7MKZ2_SOYBN	A0A0R0I9G1	K7MKZ2	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.531
A0A0R0I9G1	K7N0F5_SOYBN	A0A0R0I9G1	K7N0F5	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.606
A0A0R0JXM9	GMDCL2A	A0A0R0JXM9	I1L0G0	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.575
A0A0R0JXM9	GMDCL2B	A0A0R0JXM9	K7LBG6	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.575
A0A0R0JXM9	GMDCL3A	A0A0R0JXM9	K7KIB7	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.639
A0A0R0JXM9	I1NCK3_SOYBN	A0A0R0JXM9	I1NCK3	Uncharacterized protein.	Uncharacterized protein.	0.575
A0A0R0JXM9	K7KH72_SOYBN	A0A0R0JXM9	K7KH72	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.574
A0A0R0JXM9	K7M014_SOYBN	A0A0R0JXM9	K7M014	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.565
A0A0R0JXM9	K7MKZ2_SOYBN	A0A0R0JXM9	K7MKZ2	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.565
A0A0R0JXM9	K7N0F5_SOYBN	A0A0R0JXM9	K7N0F5	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.574
AGO5	GMDCL2A	K7LQ94	I1L0G0	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.778
AGO5	GMDCL2B	K7LQ94	K7LBG6	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.777
AGO5	GMDCL3A	K7LQ94	K7KIB7	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.723
AGO5	I1NCK3_SOYBN	K7LQ94	I1NCK3	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.608