(51 nodes) Riboflavin synthase-like beta-barrel network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R4J4Q1	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (707 aa)
	nr2	Nitrate reductase. (890 aa)
	INR1	Inducible nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (886 aa)
	INR2	Inducible nitrate reductase [NADH] 2; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (890 aa)
	K7N5A2_SOYBN	Uncharacterized protein. (889 aa)
	K7LX30_SOYBN	Cytochrome b5 heme-binding domain-containing protein. (458 aa)
	K7LL04_SOYBN	FAD-binding FR-type domain-containing protein. (713 aa)
	K7LAX4_SOYBN	Uncharacterized protein. (351 aa)
	K7KME9_SOYBN	FAD-binding FR-type domain-containing protein. (820 aa)
	I1NFS6_SOYBN	FAD-binding FR-type domain-containing protein. (271 aa)
	I1NBY2_SOYBN	Uncharacterized protein. (887 aa)
	I1N5D0_SOYBN	NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of the anamorsin/DRE2 homolog. Belongs to the NADPH-dependent diflavin oxidoreductase NDOR1 family. In the N-terminal section; belongs to the flavodoxin family. (623 aa)
	I1MT65_SOYBN	FAD-binding FR-type domain-containing protein. (821 aa)
	I1MFX7_SOYBN	FAD-binding FR-type domain-containing protein. (732 aa)
	I1MB07_SOYBN	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (689 aa)
	I1MAM5_SOYBN	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (873 aa)
	I1MAM4_SOYBN	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (886 aa)
	I1LW34_SOYBN	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (886 aa)
	I1LGC3_SOYBN	Uncharacterized protein. (927 aa)
	I1LEP0_SOYBN	FAD-binding FR-type domain-containing protein. (295 aa)
	I1L1T9_SOYBN	Uncharacterized protein. (928 aa)
	I1L091_SOYBN	FAD-binding FR-type domain-containing protein. (734 aa)
	I1KVY3_SOYBN	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (297 aa)
	I1KPG0_SOYBN	Uncharacterized protein. (941 aa)
	I1KP09_SOYBN	Uncharacterized protein. (888 aa)
	I1KJX2_SOYBN	Uncharacterized protein. (859 aa)
	I1KBU7_SOYBN	Uncharacterized protein. (941 aa)
	I1K9R6_SOYBN	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (691 aa)
	I1K6D2_SOYBN	Uncharacterized protein. (941 aa)
	I1K1F4_SOYBN	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (323 aa)
	I1JXT0_SOYBN	Uncharacterized protein. (928 aa)
	I1JRB1_SOYBN	Uncharacterized protein. (885 aa)
	I1JCG8_SOYBN	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (362 aa)
	I1JAA1_SOYBN	Uncharacterized protein. (927 aa)
	C6TKA3_SOYBN	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (319 aa)
	C6TIM5_SOYBN	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (377 aa)
	C6T8Y4_SOYBN	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (377 aa)
	A0A368UIE7	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (278 aa)
	A0A0R4J5K2	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (362 aa)
	A0A0R4J5H8	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (707 aa)
	A0A0R4J5H2	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (297 aa)
	A0A0R4J4B4	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (362 aa)
	A0A0R4J338	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (691 aa)
	A0A0R0L4H1	Uncharacterized protein. (621 aa)
	A0A0R0KKK6	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (278 aa)
	A0A0R0JYE8	Uncharacterized protein. (898 aa)
	A0A0R0HTY5	Uncharacterized protein. (825 aa)
	A0A0R0HH51	Uncharacterized protein. (275 aa)
	A0A0R0G2R3	Uncharacterized protein. (936 aa)
	A0A0R0FJE4	FAD-binding FR-type domain-containing protein. (721 aa)
	A0A0R0EM30	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (278 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0EM30	A0A0R4J338	A0A0R0EM30	A0A0R4J338	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.671
A0A0R0EM30	A0A0R4J4Q1	A0A0R0EM30	A0A0R4J4Q1	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.671
A0A0R0EM30	A0A0R4J5H8	A0A0R0EM30	A0A0R4J5H8	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.671
A0A0R0EM30	I1K9R6_SOYBN	A0A0R0EM30	I1K9R6	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.671
A0A0R0EM30	I1LW34_SOYBN	A0A0R0EM30	I1LW34	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.404
A0A0R0EM30	I1MAM4_SOYBN	A0A0R0EM30	I1MAM4	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.404
A0A0R0EM30	I1MAM5_SOYBN	A0A0R0EM30	I1MAM5	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.404
A0A0R0EM30	I1MB07_SOYBN	A0A0R0EM30	I1MB07	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.485
A0A0R0EM30	INR1	A0A0R0EM30	P54233	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Inducible nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.404
A0A0R0EM30	INR2	A0A0R0EM30	P39870	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Inducible nitrate reductase [NADH] 2; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.404
A0A0R0EM30	K7LX30_SOYBN	A0A0R0EM30	K7LX30	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Cytochrome b5 heme-binding domain-containing protein.	0.404
A0A0R0EM30	nr2	A0A0R0EM30	Q9SYR0	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Nitrate reductase.	0.404
A0A0R0KKK6	A0A0R4J338	A0A0R0KKK6	A0A0R4J338	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.671
A0A0R0KKK6	A0A0R4J4Q1	A0A0R0KKK6	A0A0R4J4Q1	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.671
A0A0R0KKK6	A0A0R4J5H8	A0A0R0KKK6	A0A0R4J5H8	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.671
A0A0R0KKK6	I1K9R6_SOYBN	A0A0R0KKK6	I1K9R6	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.671
A0A0R0KKK6	I1LW34_SOYBN	A0A0R0KKK6	I1LW34	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.404
A0A0R0KKK6	I1MAM4_SOYBN	A0A0R0KKK6	I1MAM4	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.404
A0A0R0KKK6	I1MAM5_SOYBN	A0A0R0KKK6	I1MAM5	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.404
A0A0R0KKK6	I1MB07_SOYBN	A0A0R0KKK6	I1MB07	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.485