(16 nodes) Lysozyme-like domain superfamily network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1M587_SOYBN	Chitin-binding type-1 domain-containing protein. (274 aa)
	I1KWS8_SOYBN	Glyco_hydro_19_cat domain-containing protein. (326 aa)
	I1JBA3_SOYBN	Uncharacterized protein. (281 aa)
	I1J8E1_SOYBN	Uncharacterized protein. (275 aa)
	C6TNB0_SOYBN	Glyco_hydro_19_cat domain-containing protein. (272 aa)
	C6T7J9_SOYBN	Chitin-binding type-1 domain-containing protein. (280 aa)
	A0A0R0HSB0	Uncharacterized protein. (235 aa)
	A0A0R0HQE5	Glyco_hydro_19_cat domain-containing protein. (177 aa)
	I1MMY2_SOYBN	Chitin-binding type-1 domain-containing protein. (317 aa)
	I1N4Z6_SOYBN	Glyco_hydro_19_cat domain-containing protein. (329 aa)
	K7L752_SOYBN	SLT domain-containing protein. (455 aa)
	K7LJA7_SOYBN	Glyco_hydro_19_cat domain-containing protein. (245 aa)
	K7LT36_SOYBN	Glyco_hydro_19_cat domain-containing protein. (114 aa)
	Chia1	Chitinase class I. (320 aa)
	I1MGH1_SOYBN	Glyco_hydro_19_cat domain-containing protein. (318 aa)
	I1L0T4_SOYBN	Glyco_hydro_19_cat domain-containing protein. (317 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0HQE5	I1KWS8_SOYBN	A0A0R0HQE5	I1KWS8	Glyco_hydro_19_cat domain-containing protein.	Glyco_hydro_19_cat domain-containing protein.	0.528
A0A0R0HQE5	I1L0T4_SOYBN	A0A0R0HQE5	I1L0T4	Glyco_hydro_19_cat domain-containing protein.	Glyco_hydro_19_cat domain-containing protein.	0.526
A0A0R0HQE5	I1MGH1_SOYBN	A0A0R0HQE5	I1MGH1	Glyco_hydro_19_cat domain-containing protein.	Glyco_hydro_19_cat domain-containing protein.	0.525
A0A0R0HQE5	I1N4Z6_SOYBN	A0A0R0HQE5	I1N4Z6	Glyco_hydro_19_cat domain-containing protein.	Glyco_hydro_19_cat domain-containing protein.	0.527
Chia1	I1J8E1_SOYBN	Q9SDY6	I1J8E1	Chitinase class I.	Uncharacterized protein.	0.902
Chia1	I1KWS8_SOYBN	Q9SDY6	I1KWS8	Chitinase class I.	Glyco_hydro_19_cat domain-containing protein.	0.416
Chia1	I1MMY2_SOYBN	Q9SDY6	I1MMY2	Chitinase class I.	Chitin-binding type-1 domain-containing protein.	0.901
Chia1	I1N4Z6_SOYBN	Q9SDY6	I1N4Z6	Chitinase class I.	Glyco_hydro_19_cat domain-containing protein.	0.415
I1J8E1_SOYBN	Chia1	I1J8E1	Q9SDY6	Uncharacterized protein.	Chitinase class I.	0.902
I1J8E1_SOYBN	I1KWS8_SOYBN	I1J8E1	I1KWS8	Uncharacterized protein.	Glyco_hydro_19_cat domain-containing protein.	0.413
I1J8E1_SOYBN	I1MMY2_SOYBN	I1J8E1	I1MMY2	Uncharacterized protein.	Chitin-binding type-1 domain-containing protein.	0.902
I1J8E1_SOYBN	I1N4Z6_SOYBN	I1J8E1	I1N4Z6	Uncharacterized protein.	Glyco_hydro_19_cat domain-containing protein.	0.411
I1KWS8_SOYBN	A0A0R0HQE5	I1KWS8	A0A0R0HQE5	Glyco_hydro_19_cat domain-containing protein.	Glyco_hydro_19_cat domain-containing protein.	0.528
I1KWS8_SOYBN	Chia1	I1KWS8	Q9SDY6	Glyco_hydro_19_cat domain-containing protein.	Chitinase class I.	0.416
I1KWS8_SOYBN	I1J8E1_SOYBN	I1KWS8	I1J8E1	Glyco_hydro_19_cat domain-containing protein.	Uncharacterized protein.	0.413
I1KWS8_SOYBN	I1MMY2_SOYBN	I1KWS8	I1MMY2	Glyco_hydro_19_cat domain-containing protein.	Chitin-binding type-1 domain-containing protein.	0.413
I1L0T4_SOYBN	A0A0R0HQE5	I1L0T4	A0A0R0HQE5	Glyco_hydro_19_cat domain-containing protein.	Glyco_hydro_19_cat domain-containing protein.	0.526
I1MGH1_SOYBN	A0A0R0HQE5	I1MGH1	A0A0R0HQE5	Glyco_hydro_19_cat domain-containing protein.	Glyco_hydro_19_cat domain-containing protein.	0.525
I1MMY2_SOYBN	Chia1	I1MMY2	Q9SDY6	Chitin-binding type-1 domain-containing protein.	Chitinase class I.	0.901
I1MMY2_SOYBN	I1J8E1_SOYBN	I1MMY2	I1J8E1	Chitin-binding type-1 domain-containing protein.	Uncharacterized protein.	0.902