(26 nodes) COI1, F-box network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1MRB1_SOYBN	F-box_5 domain-containing protein. (584 aa)
	A0A0R0G8J5	F-box_5 domain-containing protein. (391 aa)
	A0A0R0G9U2	Uncharacterized protein. (568 aa)
	A0A0R0JLX5	F-box_5 domain-containing protein. (718 aa)
	A0A0R0L1N9	Uncharacterized protein. (584 aa)
	I1JCY8_SOYBN	Uncharacterized protein. (573 aa)
	GMTIR1A	F-box domain-containing protein. (585 aa)
	I1JGX7_SOYBN	Uncharacterized protein. (630 aa)
	GMTIR1D	F-box domain-containing protein. (586 aa)
	I1JV53_SOYBN	Uncharacterized protein. (583 aa)
	I1K9P6_SOYBN	Uncharacterized protein. (587 aa)
	I1KLC7_SOYBN	Uncharacterized protein. (578 aa)
	I1KQQ6_SOYBN	Uncharacterized protein. (579 aa)
	I1LSG6_SOYBN	LRR F-box protein MAX2a. (711 aa)
	I1M5X7_SOYBN	F-box_5 domain-containing protein. (467 aa)
	I1MAY4_SOYBN	Uncharacterized protein. (640 aa)
	I1MCC2_SOYBN	F-box domain-containing protein. (467 aa)
	GMAFB3B	Uncharacterized protein. (572 aa)
	I1MNN2_SOYBN	Uncharacterized protein. (573 aa)
	I1MZ51_SOYBN	Uncharacterized protein. (590 aa)
	GMAFB3A	Uncharacterized protein. (572 aa)
	GMTIR1C	Uncharacterized protein. (587 aa)
	K7L3T8_SOYBN	F-box_5 domain-containing protein. (351 aa)
	GMTIR1B	F-box domain-containing protein. (585 aa)
	K7M0Y5_SOYBN	F-box_5 domain-containing protein. (607 aa)
	COI1	Coronatine-insensitive 1. (590 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0JLX5	GMTIR1A	A0A0R0JLX5	I1JFG2	F-box_5 domain-containing protein.	F-box domain-containing protein.	0.502
A0A0R0JLX5	GMTIR1B	A0A0R0JLX5	K7LGY5	F-box_5 domain-containing protein.	F-box domain-containing protein.	0.481
A0A0R0JLX5	GMTIR1D	A0A0R0JLX5	I1JQG9	F-box_5 domain-containing protein.	F-box domain-containing protein.	0.537
A0A0R0L1N9	COI1	A0A0R0L1N9	Q45FY8	Uncharacterized protein.	Coronatine-insensitive 1.	0.900
A0A0R0L1N9	I1MZ51_SOYBN	A0A0R0L1N9	I1MZ51	Uncharacterized protein.	Uncharacterized protein.	0.900
COI1	A0A0R0L1N9	Q45FY8	A0A0R0L1N9	Coronatine-insensitive 1.	Uncharacterized protein.	0.900
COI1	I1MZ51_SOYBN	Q45FY8	I1MZ51	Coronatine-insensitive 1.	Uncharacterized protein.	0.900
GMTIR1A	A0A0R0JLX5	I1JFG2	A0A0R0JLX5	F-box domain-containing protein.	F-box_5 domain-containing protein.	0.502
GMTIR1A	I1LSG6_SOYBN	I1JFG2	I1LSG6	F-box domain-containing protein.	LRR F-box protein MAX2a.	0.517
GMTIR1B	A0A0R0JLX5	K7LGY5	A0A0R0JLX5	F-box domain-containing protein.	F-box_5 domain-containing protein.	0.481
GMTIR1B	I1LSG6_SOYBN	K7LGY5	I1LSG6	F-box domain-containing protein.	LRR F-box protein MAX2a.	0.492
GMTIR1D	A0A0R0JLX5	I1JQG9	A0A0R0JLX5	F-box domain-containing protein.	F-box_5 domain-containing protein.	0.537
GMTIR1D	I1LSG6_SOYBN	I1JQG9	I1LSG6	F-box domain-containing protein.	LRR F-box protein MAX2a.	0.530
I1LSG6_SOYBN	GMTIR1A	I1LSG6	I1JFG2	LRR F-box protein MAX2a.	F-box domain-containing protein.	0.517
I1LSG6_SOYBN	GMTIR1B	I1LSG6	K7LGY5	LRR F-box protein MAX2a.	F-box domain-containing protein.	0.492
I1LSG6_SOYBN	GMTIR1D	I1LSG6	I1JQG9	LRR F-box protein MAX2a.	F-box domain-containing protein.	0.530
I1MZ51_SOYBN	A0A0R0L1N9	I1MZ51	A0A0R0L1N9	Uncharacterized protein.	Uncharacterized protein.	0.900
I1MZ51_SOYBN	COI1	I1MZ51	Q45FY8	Uncharacterized protein.	Coronatine-insensitive 1.	0.900