(9 nodes) SecY network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0EYD4	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (361 aa)
	K7LDF3_SOYBN	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (115 aa)
	K7KK87_SOYBN	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (179 aa)
	I1LV79_SOYBN	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (476 aa)
	I1LST6_SOYBN	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (476 aa)
	I1KDJ8_SOYBN	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (476 aa)
	I1KDG6_SOYBN	Uncharacterized protein. (540 aa)
	I1JNT8_SOYBN	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (564 aa)
	C6TBU3_SOYBN	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (476 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C6TBU3_SOYBN	I1KDG6_SOYBN	C6TBU3	I1KDG6	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein.	0.897
C6TBU3_SOYBN	I1KDJ8_SOYBN	C6TBU3	I1KDJ8	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543
C6TBU3_SOYBN	I1LST6_SOYBN	C6TBU3	I1LST6	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543
C6TBU3_SOYBN	I1LV79_SOYBN	C6TBU3	I1LV79	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543
C6TBU3_SOYBN	K7KK87_SOYBN	C6TBU3	K7KK87	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	0.897
C6TBU3_SOYBN	K7LDF3_SOYBN	C6TBU3	K7LDF3	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	0.540
I1KDG6_SOYBN	C6TBU3_SOYBN	I1KDG6	C6TBU3	Uncharacterized protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.897
I1KDG6_SOYBN	I1KDJ8_SOYBN	I1KDG6	I1KDJ8	Uncharacterized protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.897
I1KDG6_SOYBN	I1LST6_SOYBN	I1KDG6	I1LST6	Uncharacterized protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.897
I1KDG6_SOYBN	I1LV79_SOYBN	I1KDG6	I1LV79	Uncharacterized protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.897
I1KDJ8_SOYBN	C6TBU3_SOYBN	I1KDJ8	C6TBU3	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543
I1KDJ8_SOYBN	I1KDG6_SOYBN	I1KDJ8	I1KDG6	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein.	0.897
I1KDJ8_SOYBN	I1LST6_SOYBN	I1KDJ8	I1LST6	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543
I1KDJ8_SOYBN	I1LV79_SOYBN	I1KDJ8	I1LV79	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543
I1KDJ8_SOYBN	K7KK87_SOYBN	I1KDJ8	K7KK87	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	0.897
I1KDJ8_SOYBN	K7LDF3_SOYBN	I1KDJ8	K7LDF3	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	0.540
I1LST6_SOYBN	C6TBU3_SOYBN	I1LST6	C6TBU3	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543
I1LST6_SOYBN	I1KDG6_SOYBN	I1LST6	I1KDG6	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein.	0.897
I1LST6_SOYBN	I1KDJ8_SOYBN	I1LST6	I1KDJ8	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543
I1LST6_SOYBN	I1LV79_SOYBN	I1LST6	I1LV79	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.543