5 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1N4V8_SOYBN	Uncharacterized protein. (756 aa)
	I1KDK4_SOYBN	TPR_REGION domain-containing protein. (545 aa)
	I1LT60_SOYBN	TPR_REGION domain-containing protein. (547 aa)
	I1LWZ1_SOYBN	Uncharacterized protein. (757 aa)
	I1N6L5_SOYBN	Uncharacterized protein. (757 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1KDK4_SOYBN	I1LT60_SOYBN	I1KDK4	I1LT60	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.900
I1KDK4_SOYBN	I1LWZ1_SOYBN	I1KDK4	I1LWZ1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.976
I1KDK4_SOYBN	I1N4V8_SOYBN	I1KDK4	I1N4V8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.976
I1KDK4_SOYBN	I1N6L5_SOYBN	I1KDK4	I1N6L5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.978
I1LT60_SOYBN	I1KDK4_SOYBN	I1LT60	I1KDK4	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.900
I1LT60_SOYBN	I1LWZ1_SOYBN	I1LT60	I1LWZ1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.978
I1LT60_SOYBN	I1N4V8_SOYBN	I1LT60	I1N4V8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.976
I1LT60_SOYBN	I1N6L5_SOYBN	I1LT60	I1N6L5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.978
I1LWZ1_SOYBN	I1KDK4_SOYBN	I1LWZ1	I1KDK4	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.976
I1LWZ1_SOYBN	I1LT60_SOYBN	I1LWZ1	I1LT60	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.978
I1LWZ1_SOYBN	I1N4V8_SOYBN	I1LWZ1	I1N4V8	Uncharacterized protein.	Uncharacterized protein.	0.900
I1LWZ1_SOYBN	I1N6L5_SOYBN	I1LWZ1	I1N6L5	Uncharacterized protein.	Uncharacterized protein.	0.900
I1N4V8_SOYBN	I1KDK4_SOYBN	I1N4V8	I1KDK4	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.976
I1N4V8_SOYBN	I1LT60_SOYBN	I1N4V8	I1LT60	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.976
I1N4V8_SOYBN	I1LWZ1_SOYBN	I1N4V8	I1LWZ1	Uncharacterized protein.	Uncharacterized protein.	0.900
I1N4V8_SOYBN	I1N6L5_SOYBN	I1N4V8	I1N6L5	Uncharacterized protein.	Uncharacterized protein.	0.900
I1N6L5_SOYBN	I1KDK4_SOYBN	I1N6L5	I1KDK4	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.978
I1N6L5_SOYBN	I1LT60_SOYBN	I1N6L5	I1LT60	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.978
I1N6L5_SOYBN	I1LWZ1_SOYBN	I1N6L5	I1LWZ1	Uncharacterized protein.	Uncharacterized protein.	0.900
I1N6L5_SOYBN	I1N4V8_SOYBN	I1N6L5	I1N4V8	Uncharacterized protein.	Uncharacterized protein.	0.900