STRINGSTRING
4CL 4CL FAD3 FAD3 GmFAD2-1b GmFAD2-1b BADH2 BADH2 DEP1 DEP1 PR10 PR10 I1LLM7_SOYBN I1LLM7_SOYBN PR-10 PR-10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
4CL4-coumarate:CoA ligase. (540 aa)
FAD3Omega-3 fatty acid desaturase, endoplasmic reticulum; Microsomal (ER) omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes. It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids. (380 aa)
GmFAD2-1bMicrosomal omega-6 fatty acid desaturase. (387 aa)
BADH2Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (488 aa)
DEP1Dense and erect pancile 1. (228 aa)
PR10Pathogenesis-related protein 10; Involved in resistance against the pathogen Phytophtora sojae. Inhibits hyphal growth of Phytophtora sojae. Possesses ribonuclease activity in vitro ; Belongs to the BetVI family. (157 aa)
I1LLM7_SOYBNAsparagine synthetase [glutamine-hydrolyzing]. (579 aa)
PR-10Stress-induced protein SAM22; Involved in disease resistance. Belongs to the BetVI family. (158 aa)
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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