12 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0F8M2	Uncharacterized protein. (341 aa)
	Ipk2	Inositol polyphosphate multikinase; Inositol phosphate kinase with a broad substrate specificity. (279 aa)
	I1JMB6_SOYBN	Uncharacterized protein. (523 aa)
	I1JXK9_SOYBN	Uncharacterized protein. (515 aa)
	I1KC18_SOYBN	Uncharacterized protein. (519 aa)
	I1LLF6_SOYBN	Uncharacterized protein. (532 aa)
	I1LME6_SOYBN	Uncharacterized protein. (481 aa)
	I1MM41_SOYBN	Uncharacterized protein. (517 aa)
	I1MZD1_SOYBN	Uncharacterized protein. (481 aa)
	I1N007_SOYBN	Uncharacterized protein. (531 aa)
	I1NDW4_SOYBN	Uncharacterized protein. (530 aa)
	MIPS1	Putative myo-inositol-1-phosphate synthase. (510 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0F8M2	I1JMB6_SOYBN	A0A0R0F8M2	I1JMB6	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A0R0F8M2	I1JXK9_SOYBN	A0A0R0F8M2	I1JXK9	Uncharacterized protein.	Uncharacterized protein.	0.656
A0A0R0F8M2	I1KC18_SOYBN	A0A0R0F8M2	I1KC18	Uncharacterized protein.	Uncharacterized protein.	0.656
A0A0R0F8M2	I1LLF6_SOYBN	A0A0R0F8M2	I1LLF6	Uncharacterized protein.	Uncharacterized protein.	0.652
A0A0R0F8M2	I1MM41_SOYBN	A0A0R0F8M2	I1MM41	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A0R0F8M2	I1N007_SOYBN	A0A0R0F8M2	I1N007	Uncharacterized protein.	Uncharacterized protein.	0.652
A0A0R0F8M2	I1NDW4_SOYBN	A0A0R0F8M2	I1NDW4	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A0R0F8M2	Ipk2	A0A0R0F8M2	A7X649	Uncharacterized protein.	Inositol polyphosphate multikinase; Inositol phosphate kinase with a broad substrate specificity.	0.714
I1JMB6_SOYBN	A0A0R0F8M2	I1JMB6	A0A0R0F8M2	Uncharacterized protein.	Uncharacterized protein.	0.657
I1JMB6_SOYBN	I1JXK9_SOYBN	I1JMB6	I1JXK9	Uncharacterized protein.	Uncharacterized protein.	0.658
I1JMB6_SOYBN	I1KC18_SOYBN	I1JMB6	I1KC18	Uncharacterized protein.	Uncharacterized protein.	0.658
I1JMB6_SOYBN	I1LLF6_SOYBN	I1JMB6	I1LLF6	Uncharacterized protein.	Uncharacterized protein.	0.659
I1JMB6_SOYBN	I1MM41_SOYBN	I1JMB6	I1MM41	Uncharacterized protein.	Uncharacterized protein.	0.654
I1JMB6_SOYBN	I1N007_SOYBN	I1JMB6	I1N007	Uncharacterized protein.	Uncharacterized protein.	0.658
I1JMB6_SOYBN	I1NDW4_SOYBN	I1JMB6	I1NDW4	Uncharacterized protein.	Uncharacterized protein.	0.657
I1JMB6_SOYBN	Ipk2	I1JMB6	A7X649	Uncharacterized protein.	Inositol polyphosphate multikinase; Inositol phosphate kinase with a broad substrate specificity.	0.700
I1JXK9_SOYBN	A0A0R0F8M2	I1JXK9	A0A0R0F8M2	Uncharacterized protein.	Uncharacterized protein.	0.656
I1JXK9_SOYBN	I1JMB6_SOYBN	I1JXK9	I1JMB6	Uncharacterized protein.	Uncharacterized protein.	0.658
I1JXK9_SOYBN	I1KC18_SOYBN	I1JXK9	I1KC18	Uncharacterized protein.	Uncharacterized protein.	0.652
I1JXK9_SOYBN	I1LLF6_SOYBN	I1JXK9	I1LLF6	Uncharacterized protein.	Uncharacterized protein.	0.657