11 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MIPS1	Putative myo-inositol-1-phosphate synthase. (510 aa)
	A0A0R0EKB4	GP-PDE domain-containing protein. (440 aa)
	Ipk1	Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate). (456 aa)
	I1J673_SOYBN	WD_REPEATS_REGION domain-containing protein. (347 aa)
	I1JEL5_SOYBN	WD_REPEATS_REGION domain-containing protein. (347 aa)
	I1KUE9_SOYBN	WD_REPEATS_REGION domain-containing protein. (347 aa)
	I1LME6_SOYBN	Uncharacterized protein. (481 aa)
	I1MDV2_SOYBN	WD_REPEATS_REGION domain-containing protein. (347 aa)
	I1MLD5_SOYBN	GP-PDE domain-containing protein. (381 aa)
	I1MZD1_SOYBN	Uncharacterized protein. (481 aa)
	C2H2	C2H2 transcription factor. (172 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0EKB4	I1J673_SOYBN	A0A0R0EKB4	I1J673	GP-PDE domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.418
A0A0R0EKB4	I1JEL5_SOYBN	A0A0R0EKB4	I1JEL5	GP-PDE domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.418
A0A0R0EKB4	I1MLD5_SOYBN	A0A0R0EKB4	I1MLD5	GP-PDE domain-containing protein.	GP-PDE domain-containing protein.	0.900
A0A0R0EKB4	MIPS1	A0A0R0EKB4	Q94C02	GP-PDE domain-containing protein.	Putative myo-inositol-1-phosphate synthase.	0.503
I1J673_SOYBN	A0A0R0EKB4	I1J673	A0A0R0EKB4	WD_REPEATS_REGION domain-containing protein.	GP-PDE domain-containing protein.	0.418
I1J673_SOYBN	I1LME6_SOYBN	I1J673	I1LME6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.409
I1J673_SOYBN	I1MLD5_SOYBN	I1J673	I1MLD5	WD_REPEATS_REGION domain-containing protein.	GP-PDE domain-containing protein.	0.418
I1J673_SOYBN	I1MZD1_SOYBN	I1J673	I1MZD1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.409
I1J673_SOYBN	Ipk1	I1J673	A7X641	WD_REPEATS_REGION domain-containing protein.	Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).	0.737
I1JEL5_SOYBN	A0A0R0EKB4	I1JEL5	A0A0R0EKB4	WD_REPEATS_REGION domain-containing protein.	GP-PDE domain-containing protein.	0.418
I1JEL5_SOYBN	I1LME6_SOYBN	I1JEL5	I1LME6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.409
I1JEL5_SOYBN	I1MLD5_SOYBN	I1JEL5	I1MLD5	WD_REPEATS_REGION domain-containing protein.	GP-PDE domain-containing protein.	0.418
I1JEL5_SOYBN	I1MZD1_SOYBN	I1JEL5	I1MZD1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.409
I1JEL5_SOYBN	Ipk1	I1JEL5	A7X641	WD_REPEATS_REGION domain-containing protein.	Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).	0.737
I1KUE9_SOYBN	Ipk1	I1KUE9	A7X641	WD_REPEATS_REGION domain-containing protein.	Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).	0.728
I1LME6_SOYBN	I1J673_SOYBN	I1LME6	I1J673	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.409
I1LME6_SOYBN	I1JEL5_SOYBN	I1LME6	I1JEL5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.409
I1LME6_SOYBN	I1MZD1_SOYBN	I1LME6	I1MZD1	Uncharacterized protein.	Uncharacterized protein.	0.652
I1LME6_SOYBN	Ipk1	I1LME6	A7X641	Uncharacterized protein.	Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).	0.816
I1LME6_SOYBN	MIPS1	I1LME6	Q94C02	Uncharacterized protein.	Putative myo-inositol-1-phosphate synthase.	0.599