9 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CYP3	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (172 aa)
	A0A0R0IUQ7	Uncharacterized protein. (922 aa)
	I1MQB8_SOYBN	LigB domain-containing protein. (269 aa)
	I1MQB9_SOYBN	LigB domain-containing protein. (266 aa)
	I1MXP2_SOYBN	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (414 aa)
	K7L8M7_SOYBN	Uncharacterized protein. (957 aa)
	A0A0R0KR39	Uncharacterized protein. (928 aa)
	C6TCX9_SOYBN	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (413 aa)
	I1L3N6_SOYBN	LigB domain-containing protein. (303 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1L3N6_SOYBN	I1MQB8_SOYBN	I1L3N6	I1MQB8	LigB domain-containing protein.	LigB domain-containing protein.	0.900
I1L3N6_SOYBN	I1MQB9_SOYBN	I1L3N6	I1MQB9	LigB domain-containing protein.	LigB domain-containing protein.	0.901
I1MQB8_SOYBN	I1L3N6_SOYBN	I1MQB8	I1L3N6	LigB domain-containing protein.	LigB domain-containing protein.	0.900
I1MQB8_SOYBN	I1MQB9_SOYBN	I1MQB8	I1MQB9	LigB domain-containing protein.	LigB domain-containing protein.	0.901
I1MQB9_SOYBN	I1L3N6_SOYBN	I1MQB9	I1L3N6	LigB domain-containing protein.	LigB domain-containing protein.	0.901
I1MQB9_SOYBN	I1MQB8_SOYBN	I1MQB9	I1MQB8	LigB domain-containing protein.	LigB domain-containing protein.	0.901