(46 nodes) Mismatch repair network (Glycine max)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0ER15	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1273 aa)
	A0A0R0EYA9	Uncharacterized protein. (444 aa)
	A0A0R0J136	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1129 aa)
	A0A0R0JYB5	AAA domain-containing protein. (354 aa)
	A0A0R0K2Q4	Uncharacterized protein. (481 aa)
	C6SYE1_SOYBN	Uncharacterized protein. (106 aa)
	C6T0A0_SOYBN	Uncharacterized protein. (108 aa)
	C6TGY7_SOYBN	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	I1JFI1_SOYBN	Uncharacterized protein. (946 aa)
	I1JNK6_SOYBN	Uncharacterized protein. (433 aa)
	I1JZ54_SOYBN	AAA domain-containing protein. (363 aa)
	I1JZC3_SOYBN	DNA_mis_repair domain-containing protein. (727 aa)
	I1JZI1_SOYBN	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (620 aa)
	I1K0C4_SOYBN	AAA domain-containing protein. (331 aa)
	I1K195_SOYBN	Uncharacterized protein. (207 aa)
	I1K2W4_SOYBN	Uncharacterized protein. (112 aa)
	I1KAA7_SOYBN	AAA domain-containing protein. (361 aa)
	I1KAD1_SOYBN	AAA domain-containing protein. (342 aa)
	I1KFH0_SOYBN	Replication factor C subunit 1. (942 aa)
	I1KJ36_SOYBN	Uncharacterized protein. (575 aa)
	I1KLI9_SOYBN	Smr domain-containing protein. (914 aa)
	I1KRA4_SOYBN	Uncharacterized protein. (104 aa)
	I1LR88_SOYBN	DNA ligase. (776 aa)
	I1LRM8_SOYBN	Replication factor C subunit 1. (949 aa)
	I1LV82_SOYBN	Uncharacterized protein. (518 aa)
	I1M3Q8_SOYBN	Uncharacterized protein. (141 aa)
	I1M9R5_SOYBN	Uncharacterized protein. (292 aa)
	I1MUG2_SOYBN	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (942 aa)
	I1MUQ7_SOYBN	AAA domain-containing protein. (332 aa)
	I1MWJ6_SOYBN	Uncharacterized protein. (277 aa)
	I1N036_SOYBN	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	K7K439_SOYBN	Uncharacterized protein. (1205 aa)
	K7K4C7_SOYBN	Uncharacterized protein. (729 aa)
	K7KBQ2_SOYBN	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (264 aa)
	K7KS98_SOYBN	Uncharacterized protein. (697 aa)
	K7L666_SOYBN	Uncharacterized protein. (743 aa)
	K7LER5_SOYBN	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1079 aa)
	K7LF83_SOYBN	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (894 aa)
	K7LGX1_SOYBN	Uncharacterized protein. (944 aa)
	K7LLV5_SOYBN	Uncharacterized protein. (106 aa)
	K7LNG6_SOYBN	Uncharacterized protein. (721 aa)
	K7LWV0_SOYBN	Uncharacterized protein. (277 aa)
	K7M263_SOYBN	Uncharacterized protein. (497 aa)
	K7MVF2_SOYBN	DNA ligase. (1402 aa)
	K7N3P1_SOYBN	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (1070 aa)
	POLD1	DNA polymerase delta catalytic subunit; This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. (1088 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0ER15	A0A0R0J136	A0A0R0ER15	A0A0R0J136	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.916
A0A0R0ER15	A0A0R0K2Q4	A0A0R0ER15	A0A0R0K2Q4	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.921
A0A0R0ER15	C6TGY7_SOYBN	A0A0R0ER15	C6TGY7	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.870
A0A0R0ER15	I1JFI1_SOYBN	A0A0R0ER15	I1JFI1	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.987
A0A0R0ER15	I1JZC3_SOYBN	A0A0R0ER15	I1JZC3	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA_mis_repair domain-containing protein.	0.988
A0A0R0ER15	I1K0C4_SOYBN	A0A0R0ER15	I1K0C4	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	AAA domain-containing protein.	0.447
A0A0R0ER15	I1KJ36_SOYBN	A0A0R0ER15	I1KJ36	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.913
A0A0R0ER15	I1LR88_SOYBN	A0A0R0ER15	I1LR88	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA ligase.	0.496
A0A0R0ER15	I1M9R5_SOYBN	A0A0R0ER15	I1M9R5	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.704
A0A0R0ER15	I1MUG2_SOYBN	A0A0R0ER15	I1MUG2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.988
A0A0R0ER15	I1MUQ7_SOYBN	A0A0R0ER15	I1MUQ7	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	AAA domain-containing protein.	0.447
A0A0R0ER15	I1MWJ6_SOYBN	A0A0R0ER15	I1MWJ6	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.704
A0A0R0ER15	I1N036_SOYBN	A0A0R0ER15	I1N036	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.870
A0A0R0ER15	K7K439_SOYBN	A0A0R0ER15	K7K439	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.978
A0A0R0ER15	K7KBQ2_SOYBN	A0A0R0ER15	K7KBQ2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.870
A0A0R0ER15	K7L666_SOYBN	A0A0R0ER15	K7L666	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.921
A0A0R0ER15	K7LER5_SOYBN	A0A0R0ER15	K7LER5	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.916
A0A0R0ER15	K7LGX1_SOYBN	A0A0R0ER15	K7LGX1	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.987
A0A0R0ER15	K7LWV0_SOYBN	A0A0R0ER15	K7LWV0	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	Uncharacterized protein.	0.704
A0A0R0ER15	K7MVF2_SOYBN	A0A0R0ER15	K7MVF2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	DNA ligase.	0.677