(10 nodes) Rpd3L complex network (Botryotinia calthae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4Y8DDX6	Hist_deacetyl domain-containing protein. (633 aa)
	A0A4Y8CIE1	Zn(2)-C6 fungal-type domain-containing protein. (599 aa)
	A0A4Y8CQH2	RXT2_N domain-containing protein. (491 aa)
	A0A4Y8CTK1	Zn(2)-C6 fungal-type domain-containing protein. (639 aa)
	A0A4Y8CVW7	Uncharacterized protein. (289 aa)
	A0A4Y8CX97	PHD domain-containing protein. (585 aa)
	A0A4Y8CXS9	Uncharacterized protein. (1356 aa)
	A0A4Y8D968	Zn(2)-C6 fungal-type domain-containing protein. (592 aa)
	A0A4Y8DAK2	Chromatin modification-related protein. (707 aa)
	A0A4Y8DIB2	WD_REPEATS_REGION domain-containing protein. (437 aa)

Your Current Organism:

Botryotinia calthae

NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Y8CIE1	A0A4Y8CXS9	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.413
A0A4Y8CIE1	A0A4Y8DDX6	Zn(2)-C6 fungal-type domain-containing protein.	Hist_deacetyl domain-containing protein.	0.434
A0A4Y8CQH2	A0A4Y8CX97	RXT2_N domain-containing protein.	PHD domain-containing protein.	0.873
A0A4Y8CQH2	A0A4Y8CXS9	RXT2_N domain-containing protein.	Uncharacterized protein.	0.797
A0A4Y8CQH2	A0A4Y8DDX6	RXT2_N domain-containing protein.	Hist_deacetyl domain-containing protein.	0.864
A0A4Y8CQH2	A0A4Y8DIB2	RXT2_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.595
A0A4Y8CTK1	A0A4Y8CX97	Zn(2)-C6 fungal-type domain-containing protein.	PHD domain-containing protein.	0.445
A0A4Y8CTK1	A0A4Y8CXS9	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.490
A0A4Y8CTK1	A0A4Y8DDX6	Zn(2)-C6 fungal-type domain-containing protein.	Hist_deacetyl domain-containing protein.	0.451
A0A4Y8CX97	A0A4Y8CQH2	PHD domain-containing protein.	RXT2_N domain-containing protein.	0.873
A0A4Y8CX97	A0A4Y8CTK1	PHD domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.445
A0A4Y8CX97	A0A4Y8CXS9	PHD domain-containing protein.	Uncharacterized protein.	0.819
A0A4Y8CX97	A0A4Y8D968	PHD domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.445
A0A4Y8CX97	A0A4Y8DAK2	PHD domain-containing protein.	Chromatin modification-related protein.	0.432
A0A4Y8CX97	A0A4Y8DDX6	PHD domain-containing protein.	Hist_deacetyl domain-containing protein.	0.872
A0A4Y8CX97	A0A4Y8DIB2	PHD domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.588
A0A4Y8CXS9	A0A4Y8CIE1	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.413
A0A4Y8CXS9	A0A4Y8CQH2	Uncharacterized protein.	RXT2_N domain-containing protein.	0.797
A0A4Y8CXS9	A0A4Y8CTK1	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.490
A0A4Y8CXS9	A0A4Y8CX97	Uncharacterized protein.	PHD domain-containing protein.	0.819