(20 nodes) 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily network (Botryotinia calthae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4Y8CYK4	Uncharacterized protein. (305 aa)
	A0A4Y8DEM2	Uncharacterized protein. (318 aa)
	A0A4Y8DDW6	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (317 aa)
	A0A4Y8DCE0	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (339 aa)
	A0A4Y8DC67	Uncharacterized protein. (343 aa)
	A0A4Y8DAL5	3HCDH domain-containing protein. (439 aa)
	A0A4Y8DAF1	ApbA_C domain-containing protein. (611 aa)
	A0A4Y8D9J7	Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family. (398 aa)
	A0A4Y8D807	UDPG_MGDP_dh_C domain-containing protein. (623 aa)
	A0A4Y8D723	Uncharacterized protein. (326 aa)
	A0A4Y8D6Z7	Uncharacterized protein. (504 aa)
	A0A4Y8D2N9	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (342 aa)
	A0A4Y8D1I1	Uncharacterized protein. (771 aa)
	A0A4Y8CV22	Uncharacterized protein. (446 aa)
	A0A4Y8CTA2	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (332 aa)
	A0A4Y8CRE2	Glycerol-3-phosphate dehydrogenase [NAD(+)]. (453 aa)
	A0A4Y8CQ99	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. (439 aa)
	A0A4Y8CKU4	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (343 aa)
	A0A4Y8CJE1	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family. (530 aa)
	A0A4Y8CG46	Uncharacterized protein. (389 aa)

Your Current Organism:

Botryotinia calthae

NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Y8CG46	A0A4Y8CRE2	Uncharacterized protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.523
A0A4Y8CG46	A0A4Y8CV22	Uncharacterized protein.	Uncharacterized protein.	0.531
A0A4Y8CG46	A0A4Y8D807	Uncharacterized protein.	UDPG_MGDP_dh_C domain-containing protein.	0.852
A0A4Y8CJE1	A0A4Y8CRE2	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.457
A0A4Y8CJE1	A0A4Y8CV22	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	Uncharacterized protein.	0.629
A0A4Y8CJE1	A0A4Y8D807	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	UDPG_MGDP_dh_C domain-containing protein.	0.570
A0A4Y8CKU4	A0A4Y8CV22	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	Uncharacterized protein.	0.911
A0A4Y8CKU4	A0A4Y8CYK4	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	Uncharacterized protein.	0.739
A0A4Y8CKU4	A0A4Y8DEM2	3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.	Uncharacterized protein.	0.803
A0A4Y8CQ99	A0A4Y8CRE2	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.566
A0A4Y8CQ99	A0A4Y8D723	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	Uncharacterized protein.	0.499
A0A4Y8CQ99	A0A4Y8DDW6	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	0.499
A0A4Y8CRE2	A0A4Y8CG46	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Uncharacterized protein.	0.523
A0A4Y8CRE2	A0A4Y8CJE1	Glycerol-3-phosphate dehydrogenase [NAD(+)].	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	0.457
A0A4Y8CRE2	A0A4Y8CQ99	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	0.566
A0A4Y8CRE2	A0A4Y8CV22	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Uncharacterized protein.	0.457
A0A4Y8CRE2	A0A4Y8D807	Glycerol-3-phosphate dehydrogenase [NAD(+)].	UDPG_MGDP_dh_C domain-containing protein.	0.499
A0A4Y8CRE2	A0A4Y8DEM2	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Uncharacterized protein.	0.575
A0A4Y8CTA2	A0A4Y8D2N9	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.	0.429
A0A4Y8CV22	A0A4Y8CG46	Uncharacterized protein.	Uncharacterized protein.	0.531