(13 nodes) PAS domain network (Cycloclasticus sp. P1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q91_0443	Diguanylate cyclase with PAS/PAC sensor. (327 aa)
	Q91_0451	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein. (926 aa)
	Q91_0482	Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor. (1012 aa)
	Q91_0486	Hybrid histidine kinase. (797 aa)
	Q91_0546	Diguanylate cyclase with PAS/PAC sensor. (445 aa)
	Q91_0619	Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain. (503 aa)
	Q91_1002	Diguanylate cyclase with PAS/PAC and GAF sensors. (472 aa)
	Q91_1093	Signal transduction histidine kinase. (1140 aa)
	Q91_1250	Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor. (997 aa)
	Q91_1431	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor. (809 aa)
	Q91_1780	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor. (633 aa)
	Q91_2011	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor. (851 aa)
	ntrB	ATP-binding region, ATPase-like:Histidine kinase A. (356 aa)

Your Current Organism:

Cycloclasticus sp. P1

NCBI taxonomy Id: 385025
Other names: C. sp. P1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q91_0443	Q91_0451	Q91_0443	Q91_0451	Diguanylate cyclase with PAS/PAC sensor.	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	0.415
Q91_0443	Q91_0482	Q91_0443	Q91_0482	Diguanylate cyclase with PAS/PAC sensor.	Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor.	0.698
Q91_0443	Q91_0486	Q91_0443	Q91_0486	Diguanylate cyclase with PAS/PAC sensor.	Hybrid histidine kinase.	0.946
Q91_0443	Q91_0619	Q91_0443	Q91_0619	Diguanylate cyclase with PAS/PAC sensor.	Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain.	0.723
Q91_0443	Q91_1002	Q91_0443	Q91_1002	Diguanylate cyclase with PAS/PAC sensor.	Diguanylate cyclase with PAS/PAC and GAF sensors.	0.732
Q91_0443	Q91_1093	Q91_0443	Q91_1093	Diguanylate cyclase with PAS/PAC sensor.	Signal transduction histidine kinase.	0.563
Q91_0443	Q91_1250	Q91_0443	Q91_1250	Diguanylate cyclase with PAS/PAC sensor.	Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor.	0.803
Q91_0443	Q91_1431	Q91_0443	Q91_1431	Diguanylate cyclase with PAS/PAC sensor.	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.	0.961
Q91_0443	Q91_1780	Q91_0443	Q91_1780	Diguanylate cyclase with PAS/PAC sensor.	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.	0.907
Q91_0443	Q91_2011	Q91_0443	Q91_2011	Diguanylate cyclase with PAS/PAC sensor.	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.	0.715
Q91_0451	Q91_0443	Q91_0451	Q91_0443	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Diguanylate cyclase with PAS/PAC sensor.	0.415
Q91_0451	Q91_0482	Q91_0451	Q91_0482	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor.	0.732
Q91_0451	Q91_0486	Q91_0451	Q91_0486	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Hybrid histidine kinase.	0.957
Q91_0451	Q91_0619	Q91_0451	Q91_0619	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain.	0.639
Q91_0451	Q91_1002	Q91_0451	Q91_1002	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Diguanylate cyclase with PAS/PAC and GAF sensors.	0.777
Q91_0451	Q91_1093	Q91_0451	Q91_1093	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Signal transduction histidine kinase.	0.929
Q91_0451	Q91_1250	Q91_0451	Q91_1250	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor.	0.790
Q91_0451	Q91_1431	Q91_0451	Q91_1431	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.	0.942
Q91_0451	Q91_1780	Q91_0451	Q91_1780	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.	0.879
Q91_0451	Q91_2011	Q91_0451	Q91_2011	ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.	Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.	0.456