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Q91_0864 Q91_0864 clpX clpX lon lon Q91_0952 Q91_0952 Q91_1095 Q91_1095 Q91_1108 Q91_1108 Q91_1110 Q91_1110 Q91_1139 Q91_1139 Q91_1147 Q91_1147 clpA clpA Q91_1241 Q91_1241 nodI nodI ftsH ftsH dnaZX dnaZX Q91_1592 Q91_1592 Q91_1639 Q91_1639 Q91_1645 Q91_1645 Q91_1674 Q91_1674 Q91_1682 Q91_1682 msbA msbA Q91_1793 Q91_1793 ftsE ftsE Q91_1846 Q91_1846 rho rho Q91_2018 Q91_2018 Q91_2027 Q91_2027 hslU hslU Q91_2110 Q91_2110 Q91_2142 Q91_2142 atpD-1 atpD-1 recA recA lolD lolD Q91_0766 Q91_0766 Q91_0720 Q91_0720 Q91_0715 Q91_0715 Q91_0713 Q91_0713 radA radA dnaB dnaB Q91_0630 Q91_0630 Q91_0617 Q91_0617 Q91_0598 Q91_0598 Q91_0594 Q91_0594 Q91_0536 Q91_0536 Q91_0523 Q91_0523 ruvB ruvB Q91_0383 Q91_0383 pstB pstB clpB clpB Q91_0294 Q91_0294 Q91_0225 Q91_0225 Q91_0109 Q91_0109 Q91_0087 Q91_0087 pilT pilT pilU pilU ntrC ntrC Q91_0010 Q91_0010 Q91_0009 Q91_0009 recF recF dnaA dnaA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q91_0864AAA ATPase domain protein. (500 aa)
clpXATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (425 aa)
lonATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (803 aa)
Q91_0952Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily. (664 aa)
Q91_1095ATPase components of various ABC-type transport systems. (559 aa)
Q91_1108DNA translocase FtsK. (738 aa)
Q91_1110ATPase, AAA family domain protein. (432 aa)
Q91_1139ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component. (260 aa)
Q91_1147ABC-type antimicrobial peptide transport system ATPase component. (228 aa)
clpAATP-dependent Clp protease, ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. (754 aa)
Q91_1241ATPase, AAA family. (285 aa)
nodIABC-type multidrug transport system ATPase component. (310 aa)
ftsHATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (643 aa)
dnaZXDNA polymerase III, tau and gamma subunits, DNA elongation factor III; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (579 aa)
Q91_1592ATPase component of ABC transporters with duplicated ATPase domains. (555 aa)
Q91_1639ABC transporter, ATPase subunit. (242 aa)
Q91_1645ABC-type transport system, ATPase component. (241 aa)
Q91_1674Nod factor export ATP-binding protein I. (244 aa)
Q91_1682ABC-type transport system, ATPase component. (234 aa)
msbALipid A ABC transporter, ATP-binding/permease protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (584 aa)
Q91_1793ABC-type multidrug transport system, ATPase component. (310 aa)
ftsEATPase involved in cell division; Part of the ABC transporter FtsEX involved in cellular division. (220 aa)
Q91_1846ABC transporter, ATPase subunit. (243 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (418 aa)
Q91_2018Magnesium chelatase subunit-like ATPase. (504 aa)
Q91_2027Toxin ABC transporter ATPase and permease. (720 aa)
hslUATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (440 aa)
Q91_2110Two component, sigma54 specific, transcriptional regulator, Fis family. (455 aa)
Q91_2142ATPase component of ABC transporters with duplicated ATPase domains. (604 aa)
atpD-1H(+)-transporting two-sector ATPase, F(1) beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (460 aa)
recARecombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (342 aa)
lolDABC-type dipeptide/oligopeptide/nickel transport system ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (226 aa)
Q91_0766ABC transporter permease and ATP-binding protein. (597 aa)
Q91_0720Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN. (461 aa)
Q91_0715Sigma 54-dependent transcriptional activator containing CheY-like receiver domain. (447 aa)
Q91_0713Sigma-54 factor interaction domain-containing protein. (480 aa)
radADNA repair protein radA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (454 aa)
dnaBReplicative helicase dnaB2; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (465 aa)
Q91_0630ABC transporter with duplicated ATPase domains. (623 aa)
Q91_0617ABC transporter, ATP-binding protein/permease. (929 aa)
Q91_0598ATPase component of ABC transporter with duplicated ATPase domains. (536 aa)
Q91_0594ABC-type transporter ATPase component. (246 aa)
Q91_0536ABC-type multidrug transport system, ATPase and permease components. (602 aa)
Q91_0523ABC transporter, ATPase subunit. (324 aa)
ruvBHolliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (348 aa)
Q91_0383Type IV-A pilus assembly ATPase PilB. (569 aa)
pstBPhosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (261 aa)
clpBATP-dependent Clp protease, ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (859 aa)
Q91_0294Sigma 54-dependent transcriptional activator containing CheY-like receiver domain. (456 aa)
Q91_0225Sigma 54 response regulatory-like protein. (316 aa)
Q91_0109ABC-type antimicrobial peptide transport system, ATPase component. (219 aa)
Q91_0087ATP-dependent helicase HrpA. (1298 aa)
pilTTfp pilus assembly protein, pilus retraction ATPase PilT. (345 aa)
pilUTfp pilus assembly protein, ATPase PilU. (375 aa)
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (470 aa)
Q91_0010Urea ABC transporter ATPase protein UrtE. (231 aa)
Q91_0009Urea ABC transporter ATPase protein UrtD. (276 aa)
recFDNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (359 aa)
dnaAChromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (441 aa)
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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