(14 nodes) Mixed, incl. Rabaptin, and N-terminal extension of GAT domain network (Alligator sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GGA3	ADP-ribosylation factor-binding protein GGA3. (682 aa)
	RAB22A	Ras-related protein Rab-22A. (194 aa)
	RAB5A	Ras-related protein Rab-5A. (215 aa)
	RAB5B	Ras-related protein Rab-5B. (215 aa)
	GGA2	ADP-ribosylation factor-binding protein GGA2 isoform X1. (629 aa)
	RABEP1	Rab GTPase-binding effector protein 1. (684 aa)
	RAB5C	Ras-related protein Rab-5C. (216 aa)
	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1. (1473 aa)
	RABEP2	Rab GTPase-binding effector protein 2. (445 aa)
	LOC102387661	Rab GTPase-binding effector protein 1-like isoform X1. (173 aa)
	GGA1	ADP-ribosylation factor-binding protein GGA1. (712 aa)
	EEA1	Early endosome antigen 1. (1452 aa)
	RABGEF1	Rab5 GDP/GTP exchange factor isoform X1. (539 aa)
	RAB31	Ras-related protein Rab-31. (195 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEA1	GAPVD1	A0A3Q0H0F1	A0A3Q0FRG7	Early endosome antigen 1.	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	0.511
EEA1	LOC102387661	A0A3Q0H0F1	A0A3Q0FVH4	Early endosome antigen 1.	Rab GTPase-binding effector protein 1-like isoform X1.	0.533
EEA1	RAB22A	A0A3Q0H0F1	A0A1U7RUF6	Early endosome antigen 1.	Ras-related protein Rab-22A.	0.477
EEA1	RAB5A	A0A3Q0H0F1	A0A1U7S4J5	Early endosome antigen 1.	Ras-related protein Rab-5A.	0.931
EEA1	RAB5B	A0A3Q0H0F1	A0A1U7S5T2	Early endosome antigen 1.	Ras-related protein Rab-5B.	0.931
EEA1	RAB5C	A0A3Q0H0F1	A0A1U7SMU1	Early endosome antigen 1.	Ras-related protein Rab-5C.	0.931
EEA1	RABEP1	A0A3Q0H0F1	A0A1U7SER5	Early endosome antigen 1.	Rab GTPase-binding effector protein 1.	0.533
EEA1	RABGEF1	A0A3Q0H0F1	A0A3Q0H9H4	Early endosome antigen 1.	Rab5 GDP/GTP exchange factor isoform X1.	0.781
GAPVD1	EEA1	A0A3Q0FRG7	A0A3Q0H0F1	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Early endosome antigen 1.	0.511
GAPVD1	GGA1	A0A3Q0FRG7	A0A3Q0GWT2	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	ADP-ribosylation factor-binding protein GGA1.	0.476
GAPVD1	GGA2	A0A3Q0FRG7	A0A1U7SAN3	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	ADP-ribosylation factor-binding protein GGA2 isoform X1.	0.476
GAPVD1	LOC102387661	A0A3Q0FRG7	A0A3Q0FVH4	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Rab GTPase-binding effector protein 1-like isoform X1.	0.796
GAPVD1	RAB22A	A0A3Q0FRG7	A0A1U7RUF6	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Ras-related protein Rab-22A.	0.630
GAPVD1	RAB31	A0A3Q0FRG7	A0A3Q0HIG2	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Ras-related protein Rab-31.	0.706
GAPVD1	RAB5A	A0A3Q0FRG7	A0A1U7S4J5	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Ras-related protein Rab-5A.	0.756
GAPVD1	RAB5B	A0A3Q0FRG7	A0A1U7S5T2	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Ras-related protein Rab-5B.	0.756
GAPVD1	RAB5C	A0A3Q0FRG7	A0A1U7SMU1	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Ras-related protein Rab-5C.	0.756
GAPVD1	RABEP1	A0A3Q0FRG7	A0A1U7SER5	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Rab GTPase-binding effector protein 1.	0.796
GAPVD1	RABEP2	A0A3Q0FRG7	A0A3Q0FSX6	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Rab GTPase-binding effector protein 2.	0.745
GAPVD1	RABGEF1	A0A3Q0FRG7	A0A3Q0H9H4	GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.	Rab5 GDP/GTP exchange factor isoform X1.	0.642