STRINGSTRING
VPS25 VPS25 MVB12B MVB12B VPS36 VPS36 MVB12A MVB12A SNF8 SNF8 VPS28 VPS28 VPS37B VPS37B LOC102383613 LOC102383613 CHMP4B CHMP4B VPS37A VPS37A CHMP6 CHMP6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VPS25Vacuolar protein-sorting-associated protein 25. (267 aa)
MVB12BMultivesicular body subunit 12B. (385 aa)
VPS36Vacuolar protein-sorting-associated protein 36. (383 aa)
MVB12AMultivesicular body subunit 12A. (240 aa)
SNF8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
VPS28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (219 aa)
VPS37BVacuolar protein sorting-associated protein 37B. (267 aa)
LOC102383613Ubiquitin-conjugating enzyme E2 variant 3 isoform X1. (821 aa)
CHMP4BCharged multivesicular body protein 4b isoform X1. (243 aa)
VPS37AVacuolar protein sorting-associated protein 37A isoform X1. (333 aa)
CHMP6Charged multivesicular body protein 6. (176 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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