96 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NR0B2	Nuclear receptor subfamily 0 group B member 2. (266 aa)
	HIF1A	Hypoxia-inducible factor 1-alpha. (844 aa)
	NR4A3	Nuclear receptor subfamily 4 group A member 3. (613 aa)
	PRMT3	Protein arginine N-methyltransferase 3 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (451 aa)
	NR1H2	Oxysterols receptor LXR-beta isoform X1. (438 aa)
	CITED2	Cbp/p300-interacting transactivator 2. (190 aa)
	AHRR	Aryl hydrocarbon receptor repressor. (754 aa)
	LOC102381777	Uncharacterized protein F13E9.13, mitochondrial-like. (273 aa)
	ABCA4	Retinal-specific ATP-binding cassette transporter. (2331 aa)
	PPARG	Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] (475 aa)
	LOC102374986	Histone-arginine methyltransferase CARM1-like isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (532 aa)
	CRY1	Cryptochrome-1. (620 aa)
	BTG2	Protein BTG2. (168 aa)
	THRB	Thyroid hormone receptor beta isoform X1. (391 aa)
	LOC102382870	Cryptochrome-1-like. (530 aa)
	NRIP1	Nuclear receptor-interacting protein 1. (1162 aa)
	BHLHE40	Class E basic helix-loop-helix protein 40. (388 aa)
	CSNK1E	Casein kinase I isoform X1; Belongs to the protein kinase superfamily. (417 aa)
	LOC102374436	Nuclear receptor subfamily 0 group B member 2-like. (303 aa)
	LOC102381188	Bile acid receptor-like isoform X1. (510 aa)
	LOC102372737	LOW QUALITY PROTEIN: period circadian protein homolog 2-like. (1315 aa)
	RXRA	Retinoic acid receptor RXR-alpha isoform X2. (486 aa)
	CREB1	Cyclic AMP-responsive element-binding protein 1. (327 aa)
	LOC102381098	Estrogen-related receptor gamma isoform X2. (458 aa)
	GABPA	GA-binding protein alpha chain isoform X1. (455 aa)
	NRF1	Nuclear respiratory factor 1 isoform X1. (522 aa)
	PPARA	Peroxisome proliferator-activated receptor alpha isoform X1. (468 aa)
	NFIL3	Nuclear factor interleukin-3-regulated protein. (447 aa)
	FBXL3	F-box/LRR-repeat protein 3. (434 aa)
	AIP	AH receptor-interacting protein isoform X1. (332 aa)
	EGLN1	Egl nine homolog 1. (225 aa)
	LOC102382695	Neuronal PAS domain-containing protein 2. (698 aa)
	USF2	Upstream stimulatory factor 2 isoform X1. (332 aa)
	ABCA1	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1. (2253 aa)
	NR1D2	Nuclear receptor subfamily 1 group D member 2 isoform X2. (588 aa)
	LOC102383295	Spore wall protein 2-like isoform X1. (745 aa)
	PPARD	Peroxisome proliferator-activated receptor delta isoform X1. (442 aa)
	ESR2	Estrogen receptor beta isoform X1. (548 aa)
	LOC102384928	Aryl hydrocarbon receptor-like. (1015 aa)
	EP300	Histone acetyltransferase p300 isoform X1. (2149 aa)
	NR1H4	Bile acid receptor. (465 aa)
	NPAS2	Neuronal PAS domain-containing protein 2 isoform X1. (825 aa)
	CREBBP	CREB-binding protein. (2468 aa)
	NR5A1	Steroidogenic factor 1. (480 aa)
	NCOA3	Nuclear receptor coactivator. (1438 aa)
	NR1I3	Nuclear receptor subfamily 1 group I member 3 isoform X1. (431 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1. (680 aa)
	LOC102371615	Steroid hormone receptor ERR1. (198 aa)
	LOC112548358	Neuronal PAS domain-containing protein 2-like. (191 aa)
	PRMT1	Protein arginine N-methyltransferase 1 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (365 aa)
	ARNT	Aryl hydrocarbon receptor nuclear translocator isoform X1. (776 aa)
	RXRG	Retinoic acid receptor RXR-gamma isoform X1. (452 aa)
	PER1	Period circadian protein homolog 1 isoform X1. (1311 aa)
	ABCA7	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 7. (2283 aa)
	PERM1	PGC-1 and ERR-induced regulator in muscle protein 1. (717 aa)
	AHR	LOW QUALITY PROTEIN: aryl hydrocarbon receptor. (731 aa)
	CLOCK	Circadian locomoter output cycles protein kaput. (883 aa)
	AR	Androgen receptor isoform X2. (430 aa)
	NCOA2	Nuclear receptor coactivator. (1462 aa)
	LOC102381221	Aryl hydrocarbon receptor-like isoform X1. (1134 aa)
	RORA	Nuclear receptor ROR-alpha. (472 aa)
	PPARGC1B	Peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1. (1022 aa)
	EGLN3	Egl nine homolog 3. (281 aa)
	LOC102371433	Neuronal PAS domain-containing protein 3 isoform X1. (703 aa)
	FOXA1	Hepatocyte nuclear factor 3-alpha. (190 aa)
	CARM1	Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (548 aa)
	LOC102380891	Deoxyribodipyrimidine photo-lyase-like. (565 aa)
	NR1D1	Nuclear receptor subfamily 1 group D member 1 isoform X1. (637 aa)
	THRA	Thyroid hormone receptor alpha isoform X1. (429 aa)
	EPAS1	Endothelial PAS domain-containing protein 1 isoform X1. (814 aa)
	ESR1	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (627 aa)
	NR5A2	Nuclear receptor subfamily 5 group A member 2 isoform X1. (469 aa)
	PPARGC1A	Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1. (810 aa)
	LOC102387451	Nuclear receptor subfamily 2 group F member 1-A. (260 aa)
	CRY2	Cryptochrome-2. (547 aa)
	PRMT8	Protein arginine N-methyltransferase 8; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (447 aa)
	LOC102373234	Nuclear receptor ROR-beta-like isoform X1. (467 aa)
	GIPC3	PDZ domain-containing protein GIPC3 isoform X1. (335 aa)
	TEF	Thyrotroph embryonic factor isoform X1. (266 aa)
	HIF1AN	Hypoxia-inducible factor 1-alpha inhibitor isoform X1. (395 aa)
	PGR	Progesterone receptor. (338 aa)
	NCOA1	Nuclear receptor coactivator. (1488 aa)
	LOC112551355	Neuronal PAS domain-containing protein 4-like. (499 aa)
	VDR	Vitamin D3 receptor. (520 aa)
	LOC102377832	Nuclear receptor subfamily 1 group D member 1-like. (516 aa)
	GABPB1	GA-binding protein subunit beta-1 isoform X1. (391 aa)
	SP1	Transcription factor Sp1. (791 aa)
	GATA3	Trans-acting T-cell-specific transcription factor GATA-3. (385 aa)
	NPAS4	Neuronal PAS domain-containing protein 4. (506 aa)
	RXRB	Retinoic acid receptor RXR-beta. (435 aa)
	GABPB2	GA-binding protein subunit beta-2 isoform X1. (455 aa)
	PER3	LOW QUALITY PROTEIN: period circadian protein homolog 3. (218 aa)
	BHLHE41	Class E basic helix-loop-helix protein 41 isoform X1. (231 aa)
	ARNT2	Aryl hydrocarbon receptor nuclear translocator 2 isoform X1. (720 aa)
	USF1	Upstream stimulatory factor 1 isoform X1. (361 aa)
	NR1H3	LOW QUALITY PROTEIN: oxysterols receptor LXR-alpha. (414 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA1	ABCA7	A0A1U7SWR6	A0A3Q0G1U2	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1.	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 7.	0.901
ABCA1	NR1H2	A0A1U7SWR6	A0A1U7RL56	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1.	Oxysterols receptor LXR-beta isoform X1.	0.542
ABCA1	NR1H3	A0A1U7SWR6	A0A3Q0HPM1	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1.	LOW QUALITY PROTEIN: oxysterols receptor LXR-alpha.	0.542
ABCA4	NR1H2	A0A1U7RPS9	A0A1U7RL56	Retinal-specific ATP-binding cassette transporter.	Oxysterols receptor LXR-beta isoform X1.	0.542
ABCA4	NR1H3	A0A1U7RPS9	A0A3Q0HPM1	Retinal-specific ATP-binding cassette transporter.	LOW QUALITY PROTEIN: oxysterols receptor LXR-alpha.	0.542
ABCA7	ABCA1	A0A3Q0G1U2	A0A1U7SWR6	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 7.	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1.	0.901
ABCA7	NR1H2	A0A3Q0G1U2	A0A1U7RL56	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 7.	Oxysterols receptor LXR-beta isoform X1.	0.542
ABCA7	NR1H3	A0A3Q0G1U2	A0A3Q0HPM1	LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 7.	LOW QUALITY PROTEIN: oxysterols receptor LXR-alpha.	0.542
AHR	AIP	A0A3Q0G3J1	A0A1U7SQ87	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	AH receptor-interacting protein isoform X1.	0.770
AHR	ARNT	A0A3Q0G3J1	A0A3Q0FXT6	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Aryl hydrocarbon receptor nuclear translocator isoform X1.	0.823
AHR	ARNT2	A0A3Q0G3J1	A0A3Q0HGG3	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Aryl hydrocarbon receptor nuclear translocator 2 isoform X1.	0.823
AHR	ARNTL	A0A3Q0G3J1	A0A3Q0FSD8	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.	0.584
AHR	CLOCK	A0A3Q0G3J1	A0A3Q0G6T2	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Circadian locomoter output cycles protein kaput.	0.584
AHR	ESR1	A0A3Q0G3J1	A0A3Q0GNM7	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	0.418
AHR	LOC102382695	A0A3Q0G3J1	A0A1U7SVT5	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Neuronal PAS domain-containing protein 2.	0.584
AHR	LOC102383295	A0A3Q0G3J1	A0A1U8D602	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Spore wall protein 2-like isoform X1.	0.770
AHR	LOC112548358	A0A3Q0G3J1	A0A3Q0FU71	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Neuronal PAS domain-containing protein 2-like.	0.584
AHR	NCOA1	A0A3Q0G3J1	A0A3Q0H477	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Nuclear receptor coactivator.	0.584
AHR	NCOA2	A0A3Q0G3J1	A0A3Q0G977	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Nuclear receptor coactivator.	0.584
AHR	NCOA3	A0A3Q0G3J1	A0A3Q0FJH7	LOW QUALITY PROTEIN: aryl hydrocarbon receptor.	Nuclear receptor coactivator.	0.584