(41 nodes) Mixed, incl. Integrator complex, and CID domain network (Alligator sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	INTS2	Integrator complex subunit 2. (1192 aa)
	INTS14	Integrator complex subunit 14. (524 aa)
	TMTC1	Transmembrane and TPR repeat-containing protein 1 isoform X1. (862 aa)
	TMTC2	Transmembrane and TPR repeat-containing protein 2. (823 aa)
	CSRNP1	Cysteine/serine-rich nuclear protein 1. (581 aa)
	INTS8	Integrator complex subunit 8 isoform X1. (995 aa)
	NABP1	SOSS complex subunit B2. (212 aa)
	SLC46A3	Solute carrier family 46 member 3. (464 aa)
	INTS12	Integrator complex subunit 12. (463 aa)
	LOC102369469	Solute carrier family 22 member 13. (540 aa)
	TMTC4	Transmembrane and TPR repeat-containing protein 4 isoform X1. (452 aa)
	INTS7	Integrator complex subunit 7. (967 aa)
	INTS9	Integrator complex subunit 9 isoform X1. (658 aa)
	RPRD1B	Regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1. (326 aa)
	QSER1	Glutamine and serine-rich protein 1. (1746 aa)
	TMTC3	Transmembrane and TPR repeat-containing protein 3 isoform X1. (915 aa)
	INTS11	Integrator complex subunit 11 isoform X1. (585 aa)
	XRN2	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (961 aa)
	INIP	SOSS complex subunit C. (104 aa)
	LOC102380686	TPR and ankyrin repeat-containing protein 1-like. (558 aa)
	INTS1	Integrator complex subunit 1. (2079 aa)
	INTS5	Integrator complex subunit 5. (430 aa)
	INTS6L	Integrator complex subunit 6-like isoform X1. (826 aa)
	NABP2	SOSS complex subunit B1 isoform X1. (290 aa)
	SCAF4	Splicing factor, arginine/serine-rich 15 isoform X1. (1075 aa)
	INTS13	Integrator complex subunit 13 isoform X1. (751 aa)
	DXO	Decapping and exoribonuclease protein isoform X1. (214 aa)
	INTS4	Integrator complex subunit 4 isoform X1. (971 aa)
	LOC102379564	Transmembrane and TPR repeat-containing protein 4-like. (258 aa)
	RPRD2	Regulation of nuclear pre-mRNA domain-containing protein 2. (1412 aa)
	FAXC	Failed axon connections homolog. (286 aa)
	TRANK1	LOW QUALITY PROTEIN: TPR and ankyrin repeat-containing protein 1. (2426 aa)
	DSTYK	Dual serine/threonine and tyrosine protein kinase isoform X1. (859 aa)
	INTS6	Integrator complex subunit 6 isoform X3. (812 aa)
	LOC112550912	Solute carrier family 22 member 23-like. (88 aa)
	INTS10	LOW QUALITY PROTEIN: integrator complex subunit 10. (708 aa)
	RPRD1A	Regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1. (313 aa)
	SETX	Probable helicase senataxin isoform X1. (2872 aa)
	INTS3	Integrator complex subunit 3. (1107 aa)
	SCAF8	LOW QUALITY PROTEIN: protein SCAF8. (1354 aa)
	LOC112551771	Solute carrier family 22 member 23-like. (126 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSRNP1	LOC102369469	A0A1U7RS07	A0A1U7S1Y7	Cysteine/serine-rich nuclear protein 1.	Solute carrier family 22 member 13.	0.438
DSTYK	FAXC	A0A3Q0GST0	A0A3Q0GCH5	Dual serine/threonine and tyrosine protein kinase isoform X1.	Failed axon connections homolog.	0.555
DSTYK	QSER1	A0A3Q0GST0	A0A1U7SLK2	Dual serine/threonine and tyrosine protein kinase isoform X1.	Glutamine and serine-rich protein 1.	0.543
DSTYK	TMTC2	A0A3Q0GST0	A0A1U7RRX7	Dual serine/threonine and tyrosine protein kinase isoform X1.	Transmembrane and TPR repeat-containing protein 2.	0.572
DXO	RPRD1A	A0A3Q0FN22	A0A3Q0H580	Decapping and exoribonuclease protein isoform X1.	Regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1.	0.834
DXO	RPRD1B	A0A3Q0FN22	A0A1U7SHE2	Decapping and exoribonuclease protein isoform X1.	Regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1.	0.834
DXO	RPRD2	A0A3Q0FN22	A0A3Q0FSY0	Decapping and exoribonuclease protein isoform X1.	Regulation of nuclear pre-mRNA domain-containing protein 2.	0.637
DXO	XRN2	A0A3Q0FN22	A0A1U8D0V1	Decapping and exoribonuclease protein isoform X1.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.995
FAXC	DSTYK	A0A3Q0GCH5	A0A3Q0GST0	Failed axon connections homolog.	Dual serine/threonine and tyrosine protein kinase isoform X1.	0.555
FAXC	QSER1	A0A3Q0GCH5	A0A1U7SLK2	Failed axon connections homolog.	Glutamine and serine-rich protein 1.	0.544
FAXC	TMTC2	A0A3Q0GCH5	A0A1U7RRX7	Failed axon connections homolog.	Transmembrane and TPR repeat-containing protein 2.	0.542
INIP	INTS3	A0A1U8DGL3	A0A3Q0HA32	SOSS complex subunit C.	Integrator complex subunit 3.	0.995
INIP	NABP1	A0A1U8DGL3	A0A1U7RZ74	SOSS complex subunit C.	SOSS complex subunit B2.	0.754
INIP	NABP2	A0A1U8DGL3	A0A1U8DTD6	SOSS complex subunit C.	SOSS complex subunit B1 isoform X1.	0.754
INTS1	INTS10	A0A1U8DN57	A0A3Q0GYI4	Integrator complex subunit 1.	LOW QUALITY PROTEIN: integrator complex subunit 10.	0.995
INTS1	INTS11	A0A1U8DN57	A0A1U8CVF3	Integrator complex subunit 1.	Integrator complex subunit 11 isoform X1.	0.999
INTS1	INTS12	A0A1U8DN57	A0A1U7S1K3	Integrator complex subunit 1.	Integrator complex subunit 12.	0.997
INTS1	INTS13	A0A1U8DN57	A0A3Q0FJW1	Integrator complex subunit 1.	Integrator complex subunit 13 isoform X1.	0.999
INTS1	INTS14	A0A1U8DN57	A0A1U7RHI1	Integrator complex subunit 1.	Integrator complex subunit 14.	0.989
INTS1	INTS2	A0A1U8DN57	A0A1U7RDK5	Integrator complex subunit 1.	Integrator complex subunit 2.	0.999