10 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VPS37C	Vacuolar protein sorting-associated protein 37C. (116 aa)
	VPS28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (219 aa)
	VPS37D	Vacuolar protein sorting-associated protein 37D isoform X1. (305 aa)
	MVB12B	Multivesicular body subunit 12B. (385 aa)
	MVB12A	Multivesicular body subunit 12A. (240 aa)
	LOC102383613	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1. (821 aa)
	VPS37A	Vacuolar protein sorting-associated protein 37A isoform X1. (333 aa)
	UBAP1L	Ubiquitin-associated protein 1-like. (545 aa)
	VPS37B	Vacuolar protein sorting-associated protein 37B. (267 aa)
	UBAP1	Ubiquitin-associated protein 1. (522 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102383613	MVB12A	A0A3Q0GHP4	A0A1U7RPA3	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	Multivesicular body subunit 12A.	0.964
LOC102383613	MVB12B	A0A3Q0GHP4	A0A1U7RMI8	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	Multivesicular body subunit 12B.	0.980
LOC102383613	VPS28	A0A3Q0GHP4	A0A1U7SID2	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.999
LOC102383613	VPS37A	A0A3Q0GHP4	A0A3Q0GTW5	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	Vacuolar protein sorting-associated protein 37A isoform X1.	0.904
LOC102383613	VPS37B	A0A3Q0GHP4	A0A3Q0G7Q0	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	Vacuolar protein sorting-associated protein 37B.	0.904
LOC102383613	VPS37C	A0A3Q0GHP4	A0A3Q0GX17	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	Vacuolar protein sorting-associated protein 37C.	0.904
LOC102383613	VPS37D	A0A3Q0GHP4	A0A3Q0H9N8	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	Vacuolar protein sorting-associated protein 37D isoform X1.	0.904
MVB12A	LOC102383613	A0A1U7RPA3	A0A3Q0GHP4	Multivesicular body subunit 12A.	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	0.964
MVB12A	MVB12B	A0A1U7RPA3	A0A1U7RMI8	Multivesicular body subunit 12A.	Multivesicular body subunit 12B.	0.950
MVB12A	UBAP1	A0A1U7RPA3	A0A1U7SNB0	Multivesicular body subunit 12A.	Ubiquitin-associated protein 1.	0.456
MVB12A	UBAP1L	A0A1U7RPA3	A0A3Q0G6S9	Multivesicular body subunit 12A.	Ubiquitin-associated protein 1-like.	0.436
MVB12A	VPS28	A0A1U7RPA3	A0A1U7SID2	Multivesicular body subunit 12A.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.988
MVB12A	VPS37A	A0A1U7RPA3	A0A3Q0GTW5	Multivesicular body subunit 12A.	Vacuolar protein sorting-associated protein 37A isoform X1.	0.928
MVB12A	VPS37B	A0A1U7RPA3	A0A3Q0G7Q0	Multivesicular body subunit 12A.	Vacuolar protein sorting-associated protein 37B.	0.984
MVB12A	VPS37C	A0A1U7RPA3	A0A3Q0GX17	Multivesicular body subunit 12A.	Vacuolar protein sorting-associated protein 37C.	0.964
MVB12A	VPS37D	A0A1U7RPA3	A0A3Q0H9N8	Multivesicular body subunit 12A.	Vacuolar protein sorting-associated protein 37D isoform X1.	0.889
MVB12B	LOC102383613	A0A1U7RMI8	A0A3Q0GHP4	Multivesicular body subunit 12B.	Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.	0.980
MVB12B	MVB12A	A0A1U7RMI8	A0A1U7RPA3	Multivesicular body subunit 12B.	Multivesicular body subunit 12A.	0.950
MVB12B	UBAP1	A0A1U7RMI8	A0A1U7SNB0	Multivesicular body subunit 12B.	Ubiquitin-associated protein 1.	0.456
MVB12B	UBAP1L	A0A1U7RMI8	A0A3Q0G6S9	Multivesicular body subunit 12B.	Ubiquitin-associated protein 1-like.	0.436