23 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RILPL2	RILP-like protein 2. (87 aa)
	COL15A1	Collagen alpha-1(XV) chain isoform X1. (1303 aa)
	COL18A1	Collagen alpha-1(XVIII) chain isoform X2. (1578 aa)
	TNMD	Tenomodulin isoform X2. (318 aa)
	FRMD6	FERM domain-containing protein 6. (614 aa)
	RAB25	Ras-related protein Rab-25. (214 aa)
	ROCK1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1377 aa)
	FRMD1	FERM domain-containing protein 1 isoform X1. (617 aa)
	DACT2	Dapper homolog 2. (840 aa)
	RILPL1	RILP-like protein 1 isoform X1. (269 aa)
	CLIC4	Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (255 aa)
	AR	Androgen receptor isoform X2. (430 aa)
	BCL11B	LOW QUALITY PROTEIN: B-cell lymphoma/leukemia 11B. (886 aa)
	MET	Hepatocyte growth factor receptor isoform X1. (1384 aa)
	FAT1	Protocadherin Fat 1 isoform X1. (4669 aa)
	HOXA13	LOW QUALITY PROTEIN: homeobox protein Hox-A13. (316 aa)
	EPB41L5	Band 4.1-like protein 5 isoform X1. (736 aa)
	POF1B	Protein POF1B isoform X1. (489 aa)
	LOC102385059	Suppressor of tumorigenicity 14 protein-like. (817 aa)
	COL22A1	Collagen alpha-1(XXII) chain. (1618 aa)
	ARHGEF26	Rho guanine nucleotide exchange factor 26 isoform X1. (590 aa)
	ST14	Suppressor of tumorigenicity 14 protein homolog; Degrades extracellular matrix. (842 aa)
	VSIG1	V-set and immunoglobulin domain-containing protein 1. (335 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COL22A1	MET	A0A3Q0HEU8	A0A3Q0GP31	Collagen alpha-1(XXII) chain.	Hepatocyte growth factor receptor isoform X1.	0.435
DACT2	FRMD1	A0A3Q0FWJ9	A0A3Q0FU91	Dapper homolog 2.	FERM domain-containing protein 1 isoform X1.	0.401
FRMD1	DACT2	A0A3Q0FU91	A0A3Q0FWJ9	FERM domain-containing protein 1 isoform X1.	Dapper homolog 2.	0.401
LOC102385059	MET	A0A3Q0HDK0	A0A3Q0GP31	Suppressor of tumorigenicity 14 protein-like.	Hepatocyte growth factor receptor isoform X1.	0.590
MET	COL22A1	A0A3Q0GP31	A0A3Q0HEU8	Hepatocyte growth factor receptor isoform X1.	Collagen alpha-1(XXII) chain.	0.435
MET	LOC102385059	A0A3Q0GP31	A0A3Q0HDK0	Hepatocyte growth factor receptor isoform X1.	Suppressor of tumorigenicity 14 protein-like.	0.590
MET	RAB25	A0A3Q0GP31	A0A1U7S7I8	Hepatocyte growth factor receptor isoform X1.	Ras-related protein Rab-25.	0.426
MET	ST14	A0A3Q0GP31	A0A3Q0HGD3	Hepatocyte growth factor receptor isoform X1.	Suppressor of tumorigenicity 14 protein homolog; Degrades extracellular matrix.	0.590
RAB25	MET	A0A1U7S7I8	A0A3Q0GP31	Ras-related protein Rab-25.	Hepatocyte growth factor receptor isoform X1.	0.426
ST14	MET	A0A3Q0HGD3	A0A3Q0GP31	Suppressor of tumorigenicity 14 protein homolog; Degrades extracellular matrix.	Hepatocyte growth factor receptor isoform X1.	0.590