STRINGSTRING
LOC102375469 LOC102375469 PLOD1 PLOD1 VIPAS39 VIPAS39 FKBP10 FKBP10 OGFOD2 OGFOD2 LOC102379166 LOC102379166 VPS33B VPS33B JMJD6 JMJD6 PLOD2 PLOD2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102375469Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like. (155 aa)
PLOD1Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (707 aa)
VIPAS39Spermatogenesis-defective protein 39 homolog isoform X1. (487 aa)
FKBP10Peptidylprolyl isomerase. (564 aa)
OGFOD22-oxoglutarate and iron-dependent oxygenase domain-containing protein 2. (190 aa)
LOC102379166Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (794 aa)
VPS33BVacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. (572 aa)
JMJD6Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6. (373 aa)
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1. (743 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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