STRINGSTRING
LOC102381636 LOC102381636 APOH APOH LDLR LDLR LOC102367850 LOC102367850 VLDLR VLDLR APOB APOB LCAT LCAT APOA1 APOA1 PLTP PLTP LOC102384651 LOC102384651 APOE APOE LIPC LIPC APOA4 APOA4 APOM APOM LOC102387409 LOC102387409 SELENOS SELENOS LOC102382137 LOC102382137 LPL LPL LRP8 LRP8 APOA5 APOA5 CETP CETP GPLD1 GPLD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102381636Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (127 aa)
APOHBeta-2-glycoprotein 1. (350 aa)
LDLRLow-density lipoprotein receptor isoform X1. (920 aa)
LOC102367850Apovitellenin-1-like. (105 aa)
VLDLRVery low-density lipoprotein receptor. (861 aa)
APOBApolipoprotein B-100. (3654 aa)
LCATPhosphatidylcholine-sterol acyltransferase. (580 aa)
APOA1Apolipoprotein A-I. (259 aa)
PLTPPhospholipid transfer protein. (489 aa)
LOC102384651Apolipoprotein B-100-like. (991 aa)
APOEApolipoprotein E isoform X1. (252 aa)
LIPCHepatic triacylglycerol lipase. (498 aa)
APOA4Apolipoprotein A-IV isoform X1. (396 aa)
APOMApolipoprotein M. (184 aa)
LOC102387409Apolipoprotein A-II-like. (103 aa)
SELENOSSelenoprotein S. (188 aa)
LOC102382137Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (167 aa)
LPLLipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. (520 aa)
LRP8Low-density lipoprotein receptor-related protein 8. (1181 aa)
APOA5Apolipoprotein A-V isoform X1. (365 aa)
CETPLOW QUALITY PROTEIN: cholesteryl ester transfer protein. (223 aa)
GPLD1Phosphatidylinositol-glycan-specific phospholipase D isoform X1. (869 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.