STRINGSTRING
SLIT2 SLIT2 LYPD3 LYPD3 AGRN AGRN LGALS3 LGALS3 THBS1 THBS1 LOC102375676 LOC102375676 LOC106721843 LOC106721843 LOC102371273 LOC102371273 RPSA RPSA DAG1 DAG1 LOC102379481 LOC102379481 NTN4 NTN4 LGALS1 LGALS1 MCAM MCAM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SLIT2Slit homolog 2 protein. (1435 aa)
LYPD3ly6/PLAUR domain-containing protein 3. (169 aa)
AGRNAgrin. (1958 aa)
LGALS3Galectin. (317 aa)
THBS1Thrombospondin-1 isoform X1. (1213 aa)
LOC102375676Basal cell adhesion molecule-like. (285 aa)
LOC106721843Netrin-4-like isoform X1. (647 aa)
LOC102371273ly6/PLAUR domain-containing protein 3-like. (250 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (296 aa)
DAG1Dystroglycan isoform X1. (894 aa)
LOC102379481Galectin. (134 aa)
NTN4Netrin-4 isoform X1. (590 aa)
LGALS1Galectin. (134 aa)
MCAMCell surface glycoprotein MUC18 isoform X1. (746 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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