15 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABCG1	ATP-binding cassette sub-family G member 1. (677 aa)
	ABCG4	ATP-binding cassette sub-family G member 4 isoform X1. (596 aa)
	LPCAT3	Lysophospholipid acyltransferase 5 isoform X1; Belongs to the membrane-bound acyltransferase family. (514 aa)
	SREBF2	Sterol regulatory element-binding protein 2 isoform X1. (1096 aa)
	SCAP	Sterol regulatory element-binding protein cleavage-activating protein isoform X1. (1342 aa)
	LOC102384651	Apolipoprotein B-100-like. (991 aa)
	LOC102374014	Erlin-1 isoform X3. (294 aa)
	APOB	Apolipoprotein B-100. (3654 aa)
	FGF1	Multifunctional fusion protein; Plays an important role in the regulation of cell survival, cell division, angiogenesis, cell differentiation and cell migration. Functions as potent mitogen in vitro. Acts as a ligand for FGFR1 and integrins. Binds to FGFR1 in the presence of heparin leading to FGFR1 dimerization and activation via sequential autophosphorylation on tyrosine residues which act as docking sites for interacting proteins, leading to the activation of several signaling cascades. Binds to integrins. Its binding to integrins and subsequent ternary complex formation with integr [...] (155 aa)
	SEC14L2	SEC14-like protein 2. (409 aa)
	PODN	Podocan. (600 aa)
	SEC14L5	SEC14-like protein 5. (709 aa)
	SREBF1	Sterol regulatory element-binding protein 1 isoform X2. (1237 aa)
	LOC102370558	Erlin-2 isoform X1. (356 aa)
	RUSC1	RUN and SH3 domain-containing protein 1. (1198 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOB	LOC102384651	A0A1U7SB35	A0A1U7SVD5	Apolipoprotein B-100.	Apolipoprotein B-100-like.	0.907
LOC102384651	APOB	A0A1U7SVD5	A0A1U7SB35	Apolipoprotein B-100-like.	Apolipoprotein B-100.	0.907
SCAP	SREBF1	A0A3Q0FP60	A0A3Q0GKX1	Sterol regulatory element-binding protein cleavage-activating protein isoform X1.	Sterol regulatory element-binding protein 1 isoform X2.	0.953
SCAP	SREBF2	A0A3Q0FP60	A0A3Q0H2U1	Sterol regulatory element-binding protein cleavage-activating protein isoform X1.	Sterol regulatory element-binding protein 2 isoform X1.	0.953
SREBF1	SCAP	A0A3Q0GKX1	A0A3Q0FP60	Sterol regulatory element-binding protein 1 isoform X2.	Sterol regulatory element-binding protein cleavage-activating protein isoform X1.	0.953
SREBF2	SCAP	A0A3Q0H2U1	A0A3Q0FP60	Sterol regulatory element-binding protein 2 isoform X1.	Sterol regulatory element-binding protein cleavage-activating protein isoform X1.	0.953