STRINGSTRING
FMR1 FMR1 DCTN6 DCTN6 LOC102388050 LOC102388050 TPR TPR CENPF CENPF BICD1 BICD1 NUMA1 NUMA1 CUNH16orf71 CUNH16orf71 CCDC155 CCDC155 BICD2 BICD2 DNAAF1 DNAAF1 ATMIN ATMIN PPP1R42 PPP1R42 CCDC38 CCDC38 RAB29 RAB29 SMC3 SMC3 FBXW11 FBXW11 GPSM2 GPSM2 CFAP100 CFAP100 PAFAH1B1 PAFAH1B1 LOC102376269 LOC102376269
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FMR1Synaptic functional regulator FMR1. (480 aa)
DCTN6Dynactin subunit 6. (190 aa)
LOC102388050Uncharacterized protein LOC102388050. (344 aa)
TPRNucleoprotein TPR isoform X1. (2367 aa)
CENPFCentromere protein F. (2969 aa)
BICD1Protein bicaudal D homolog 1 isoform X10. (991 aa)
NUMA1Nuclear mitotic apparatus protein 1. (2212 aa)
CUNH16orf71Uncharacterized protein C16orf71 homolog. (692 aa)
CCDC155Protein KASH5. (698 aa)
BICD2Protein bicaudal D homolog 2 isoform X1. (777 aa)
DNAAF1Dynein assembly factor 1, axonemal. (799 aa)
ATMINATM interactor isoform X1. (746 aa)
PPP1R42Protein phosphatase 1 regulatory subunit 42 isoform X1. (358 aa)
CCDC38Coiled-coil domain-containing protein 38. (566 aa)
RAB29Ras-related protein Rab-7L1 isoform X1. (213 aa)
SMC3Structural maintenance of chromosomes protein. (1356 aa)
FBXW11F-box/WD repeat-containing protein 11 isoform X1. (531 aa)
GPSM2G-protein-signaling modulator 2. (665 aa)
CFAP100Cilia- and flagella-associated protein 100 isoform X1. (631 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
LOC102376269Uncharacterized protein LOC102376269. (268 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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