22 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	APOB	Apolipoprotein B-100. (3654 aa)
	SEC24B	Protein transport protein Sec24B. (1193 aa)
	MIA3	Transport and Golgi organization protein 1 homolog. (1986 aa)
	SAR1A	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	SEC24D	Protein transport protein Sec24D. (1038 aa)
	SEC16A	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2471 aa)
	SEC24C	Protein transport protein Sec24C isoform X1. (1186 aa)
	PLPP3	Phospholipid phosphatase 3. (314 aa)
	SEC24A	Protein transport protein Sec24A isoform X1. (1101 aa)
	MIA2	Uncharacterized protein MIA2 isoform X1. (2218 aa)
	PREB	Prolactin regulatory element-binding protein. (429 aa)
	SEC31B	Protein transport protein Sec31B. (1228 aa)
	SEC23A	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
	SAR1B	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	MPPE1	Metallophosphoesterase 1 isoform X1. (395 aa)
	LOC102371683	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (1061 aa)
	LRRK2	Leucine-rich repeat serine/threonine-protein kinase 2 isoform X1. (2410 aa)
	PDCD6IP	LOW QUALITY PROTEIN: programmed cell death 6-interacting protein. (848 aa)
	LOC102384651	Apolipoprotein B-100-like. (991 aa)
	TFG	Protein TFG. (396 aa)
	SEC23B	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (770 aa)
	SEC31A	Protein transport protein Sec31A isoform X1. (1264 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOB	LOC102384651	A0A1U7SB35	A0A1U7SVD5	Apolipoprotein B-100.	Apolipoprotein B-100-like.	0.907
APOB	SAR1A	A0A1U7SB35	A0A1U7S285	Apolipoprotein B-100.	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	0.426
APOB	SAR1B	A0A1U7SB35	A0A1U8E068	Apolipoprotein B-100.	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.	0.426
LOC102371683	PREB	A0A1U8DF61	A0A3Q0HHC7	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Prolactin regulatory element-binding protein.	0.608
LOC102371683	SAR1A	A0A1U8DF61	A0A1U7S285	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	0.768
LOC102371683	SAR1B	A0A1U8DF61	A0A1U8E068	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.	0.768
LOC102371683	SEC23A	A0A1U8DF61	A0A3Q0GC06	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.875
LOC102371683	SEC23B	A0A1U8DF61	A0A1U7SHC6	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.875
LOC102371683	SEC24A	A0A1U8DF61	A0A1U7R4Q3	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec24A isoform X1.	0.885
LOC102371683	SEC24B	A0A1U8DF61	A0A1U7S509	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec24B.	0.885
LOC102371683	SEC24C	A0A1U8DF61	A0A1U7RNW9	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec24C isoform X1.	0.932
LOC102371683	SEC24D	A0A1U8DF61	A0A1U7RSZ1	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec24D.	0.907
LOC102371683	SEC31A	A0A1U8DF61	A0A1U7SGZ4	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec31A isoform X1.	0.807
LOC102371683	SEC31B	A0A1U8DF61	A0A3Q0GZ31	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein transport protein Sec31B.	0.807
LOC102371683	TFG	A0A1U8DF61	A0A1U7SMD5	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	Protein TFG.	0.760
LOC102384651	APOB	A0A1U7SVD5	A0A1U7SB35	Apolipoprotein B-100-like.	Apolipoprotein B-100.	0.907
LOC102384651	SAR1A	A0A1U7SVD5	A0A1U7S285	Apolipoprotein B-100-like.	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	0.426
LOC102384651	SAR1B	A0A1U7SVD5	A0A1U8E068	Apolipoprotein B-100-like.	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.	0.426
MIA2	PREB	A0A1U7R0Z2	A0A3Q0HHC7	Uncharacterized protein MIA2 isoform X1.	Prolactin regulatory element-binding protein.	0.807
MIA2	SEC23A	A0A1U7R0Z2	A0A3Q0GC06	Uncharacterized protein MIA2 isoform X1.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.525