STRINGSTRING
UBXN1 UBXN1 RNFT2 RNFT2 RNFT1 RNFT1 USP13 USP13 CAV3 CAV3 SGTA SGTA AQP11 AQP11 TMEM259 TMEM259 BAG6 BAG6 USP19 USP19 SVIP SVIP CAV1 CAV1 USP14 USP14 HERPUD1 HERPUD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBXN1UBX domain-containing protein 1. (208 aa)
RNFT2RING finger and transmembrane domain-containing protein 2 isoform X1. (465 aa)
RNFT1E3 ubiquitin-protein ligase RNFT1. (389 aa)
USP13Ubiquitin carboxyl-terminal hydrolase. (835 aa)
CAV3Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (151 aa)
SGTASmall glutamine-rich tetratricopeptide repeat-containing protein alpha isoform X1. (312 aa)
AQP11Aquaporin-11; Belongs to the MIP/aquaporin (TC 1.A.8) family. (220 aa)
TMEM259Membralin isoform X1. (746 aa)
BAG6LOW QUALITY PROTEIN: large proline-rich protein BAG6. (1178 aa)
USP19LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 19. (2609 aa)
SVIPSmall VCP/p97-interacting protein. (69 aa)
CAV1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (128 aa)
USP14Ubiquitin carboxyl-terminal hydrolase. (555 aa)
HERPUD1Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein. (297 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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