15 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	INPP5B	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3. (921 aa)
	RAB9B	Ras-related protein Rab-9B. (201 aa)
	ANXA3	Annexin. (323 aa)
	RAB9A	Ras-related protein Rab-9A. (201 aa)
	CORO1B	Coronin; Belongs to the WD repeat coronin family. (484 aa)
	PIP4P2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (266 aa)
	CORO6	Coronin; Belongs to the WD repeat coronin family. (659 aa)
	PIP4P1	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (197 aa)
	LAMP1	Lysosome-associated membrane glycoprotein 1 isoform X1. (427 aa)
	RAB31	Ras-related protein Rab-31. (195 aa)
	CORO1C	Coronin; Belongs to the WD repeat coronin family. (951 aa)
	OCRL	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1. (836 aa)
	PIKFYVE	1-phosphatidylinositol 3-phosphate 5-kinase. (2126 aa)
	EMILIN2	EMILIN-2. (1006 aa)
	LOC112551641	Uncharacterized protein LOC112551641. (285 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
INPP5B	OCRL	A0A3Q0HFQ8	A0A3Q0H2B5	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	0.951
INPP5B	PIP4P1	A0A3Q0HFQ8	A0A3Q0FRJ0	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.900
OCRL	INPP5B	A0A3Q0H2B5	A0A3Q0HFQ8	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	0.951
OCRL	PIP4P1	A0A3Q0H2B5	A0A3Q0FRJ0	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.900
OCRL	RAB31	A0A3Q0H2B5	A0A3Q0HIG2	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	Ras-related protein Rab-31.	0.411
PIKFYVE	PIP4P1	A0A3Q0H2T4	A0A3Q0FRJ0	1-phosphatidylinositol 3-phosphate 5-kinase.	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	0.903
PIP4P1	INPP5B	A0A3Q0FRJ0	A0A3Q0HFQ8	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	0.900
PIP4P1	OCRL	A0A3Q0FRJ0	A0A3Q0H2B5	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	0.900
PIP4P1	PIKFYVE	A0A3Q0FRJ0	A0A3Q0H2T4	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).	1-phosphatidylinositol 3-phosphate 5-kinase.	0.903
RAB31	OCRL	A0A3Q0HIG2	A0A3Q0H2B5	Ras-related protein Rab-31.	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	0.411
RAB31	RAB9A	A0A3Q0HIG2	A0A1U7S3A3	Ras-related protein Rab-31.	Ras-related protein Rab-9A.	0.484
RAB31	RAB9B	A0A3Q0HIG2	A0A1U7RNL6	Ras-related protein Rab-31.	Ras-related protein Rab-9B.	0.489
RAB9A	RAB31	A0A1U7S3A3	A0A3Q0HIG2	Ras-related protein Rab-9A.	Ras-related protein Rab-31.	0.484
RAB9A	RAB9B	A0A1U7S3A3	A0A1U7RNL6	Ras-related protein Rab-9A.	Ras-related protein Rab-9B.	0.901
RAB9B	RAB31	A0A1U7RNL6	A0A3Q0HIG2	Ras-related protein Rab-9B.	Ras-related protein Rab-31.	0.489
RAB9B	RAB9A	A0A1U7RNL6	A0A1U7S3A3	Ras-related protein Rab-9B.	Ras-related protein Rab-9A.	0.901