STRINGSTRING
APOA5 APOA5 LOC112547960 LOC112547960 LOC112547956 LOC112547956 APOM APOM APOA4 APOA4 LIPC LIPC APOE APOE APOF APOF PLTP PLTP APOA1 APOA1 LCAT LCAT LOC102381636 LOC102381636 LOC112548547 LOC112548547 LOC112548659 LOC112548659 LOC112548545 LOC112548545 LOC112548550 LOC112548550 LOC102387409 LOC102387409 LOC102382137 LOC102382137
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APOA5Apolipoprotein A-V isoform X1. (365 aa)
LOC112547960Uncharacterized protein LOC112547960. (217 aa)
LOC112547956LOW QUALITY PROTEIN: uncharacterized protein LOC112547956. (511 aa)
APOMApolipoprotein M. (184 aa)
APOA4Apolipoprotein A-IV isoform X1. (396 aa)
LIPCHepatic triacylglycerol lipase. (498 aa)
APOEApolipoprotein E isoform X1. (252 aa)
APOFApolipoprotein F. (439 aa)
PLTPPhospholipid transfer protein. (489 aa)
APOA1Apolipoprotein A-I. (259 aa)
LCATPhosphatidylcholine-sterol acyltransferase. (580 aa)
LOC102381636Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (127 aa)
LOC112548547Uncharacterized protein LOC112548547. (493 aa)
LOC112548659Uncharacterized protein LOC112548659. (210 aa)
LOC112548545Uncharacterized protein LOC112548545. (455 aa)
LOC112548550Uncharacterized protein LOC112548550. (472 aa)
LOC102387409Apolipoprotein A-II-like. (103 aa)
LOC102382137Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (167 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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