19 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GRIN3B	Glutamate receptor ionotropic, NMDA 3B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (874 aa)
	LOC102370596	Probable glutamate receptor; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (511 aa)
	GRID1	Glutamate receptor ionotropic, delta-1. (928 aa)
	GRIA3	Glutamate receptor 3. (886 aa)
	LOC102371662	Glutamate receptor ionotropic, kainate 2. (908 aa)
	GRIN3A	Glutamate receptor ionotropic, NMDA 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (885 aa)
	GRIN2A	Glutamate receptor ionotropic, NMDA 2A. (1424 aa)
	GRIA1	Glutamate receptor 1 isoform X2. (902 aa)
	GRIA4	Glutamate receptor 4 isoform X1. (902 aa)
	GRIA2	Glutamate receptor 2 isoform X1. (942 aa)
	GRIK4	Glutamate receptor ionotropic, kainate 4 isoform X1. (959 aa)
	GRIK5	Glutamate receptor ionotropic, kainate 5. (865 aa)
	GRIK3	Glutamate receptor ionotropic, kainate 3. (879 aa)
	GRIN1	Glutamate receptor ionotropic, NMDA 1. (940 aa)
	GRIN2B	Glutamate receptor ionotropic, NMDA 2B. (1501 aa)
	GRIK1	Glutamate receptor ionotropic, kainate 1. (905 aa)
	GRID2	Glutamate receptor ionotropic, delta-2. (1007 aa)
	GRIN2C	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2C. (1397 aa)
	GRIN2D	Glutamate receptor ionotropic, NMDA 2D. (1534 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GRIA1	GRIA2	A0A1U7RCC6	A0A1U7RNI1	Glutamate receptor 1 isoform X2.	Glutamate receptor 2 isoform X1.	0.987
GRIA1	GRIA3	A0A1U7RCC6	A0A1U7SDG5	Glutamate receptor 1 isoform X2.	Glutamate receptor 3.	0.964
GRIA1	GRIA4	A0A1U7RCC6	A0A1U7RFD4	Glutamate receptor 1 isoform X2.	Glutamate receptor 4 isoform X1.	0.891
GRIA1	GRIN1	A0A1U7RCC6	A0A3Q0H3G4	Glutamate receptor 1 isoform X2.	Glutamate receptor ionotropic, NMDA 1.	0.597
GRIA1	GRIN2A	A0A1U7RCC6	A0A1U7R8T7	Glutamate receptor 1 isoform X2.	Glutamate receptor ionotropic, NMDA 2A.	0.510
GRIA1	GRIN2B	A0A1U7RCC6	A0A3Q0GMD1	Glutamate receptor 1 isoform X2.	Glutamate receptor ionotropic, NMDA 2B.	0.501
GRIA2	GRIA1	A0A1U7RNI1	A0A1U7RCC6	Glutamate receptor 2 isoform X1.	Glutamate receptor 1 isoform X2.	0.987
GRIA2	GRIA3	A0A1U7RNI1	A0A1U7SDG5	Glutamate receptor 2 isoform X1.	Glutamate receptor 3.	0.997
GRIA2	GRIA4	A0A1U7RNI1	A0A1U7RFD4	Glutamate receptor 2 isoform X1.	Glutamate receptor 4 isoform X1.	0.975
GRIA2	GRIN1	A0A1U7RNI1	A0A3Q0H3G4	Glutamate receptor 2 isoform X1.	Glutamate receptor ionotropic, NMDA 1.	0.520
GRIA2	GRIN2A	A0A1U7RNI1	A0A1U7R8T7	Glutamate receptor 2 isoform X1.	Glutamate receptor ionotropic, NMDA 2A.	0.472
GRIA2	GRIN2B	A0A1U7RNI1	A0A3Q0GMD1	Glutamate receptor 2 isoform X1.	Glutamate receptor ionotropic, NMDA 2B.	0.414
GRIA3	GRIA1	A0A1U7SDG5	A0A1U7RCC6	Glutamate receptor 3.	Glutamate receptor 1 isoform X2.	0.964
GRIA3	GRIA2	A0A1U7SDG5	A0A1U7RNI1	Glutamate receptor 3.	Glutamate receptor 2 isoform X1.	0.997
GRIA3	GRIA4	A0A1U7SDG5	A0A1U7RFD4	Glutamate receptor 3.	Glutamate receptor 4 isoform X1.	0.790
GRIA3	GRIN1	A0A1U7SDG5	A0A3Q0H3G4	Glutamate receptor 3.	Glutamate receptor ionotropic, NMDA 1.	0.501
GRIA4	GRIA1	A0A1U7RFD4	A0A1U7RCC6	Glutamate receptor 4 isoform X1.	Glutamate receptor 1 isoform X2.	0.891
GRIA4	GRIA2	A0A1U7RFD4	A0A1U7RNI1	Glutamate receptor 4 isoform X1.	Glutamate receptor 2 isoform X1.	0.975
GRIA4	GRIA3	A0A1U7RFD4	A0A1U7SDG5	Glutamate receptor 4 isoform X1.	Glutamate receptor 3.	0.790
GRIA4	GRIN1	A0A1U7RFD4	A0A3Q0H3G4	Glutamate receptor 4 isoform X1.	Glutamate receptor ionotropic, NMDA 1.	0.501