27 items (Alligator sinensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	DNASE1L2	Deoxyribonuclease-1-like 2 isoform X1. (375 aa)
	INPP5E	72 kDa inositol polyphosphate 5-phosphatase. (618 aa)
	SYNJ2	Synaptojanin-2 isoform X1. (1459 aa)
	ANGEL2	Protein angel homolog 2. (569 aa)
	EEPD1	Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (559 aa)
	PDE12	2',5'-phosphodiesterase 12. (442 aa)
	SYNJ1	Synaptojanin-1. (1589 aa)
	TDP2	tyrosyl-DNA phosphodiesterase 2. (364 aa)
	NOCT	Nocturnin isoform X1. (417 aa)
	LOC112551886	Kielin/chordin-like protein. (354 aa)
	INPP5J	Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X1. (1054 aa)
	APEX2	DNA-(Apurinic or apyrimidinic site) lyase 2 isoform X1. (388 aa)
	OCRL	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1. (836 aa)
	INPP5B	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3. (921 aa)
	CNOT6L	CCR4-NOT transcription complex subunit 6-like. (550 aa)
	SRI	Sorcin. (302 aa)
	LOC102375443	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2-like isoform X1. (1114 aa)
	INPPL1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2. (1267 aa)
	INPP5K	Inositol polyphosphate 5-phosphatase K. (457 aa)
	INPP5D	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1. (1209 aa)
	CNOT6	CCR4-NOT transcription complex subunit 6 isoform X1. (544 aa)
	SMPD2	Sphingomyelin phosphodiesterase 2. (413 aa)
	ANGEL1	Protein angel homolog 1. (576 aa)
	LOC102368100	Type I inositol 1,4,5-trisphosphate 5-phosphatase-like. (157 aa)
	APEX1	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
	DNASE1L3	Deoxyribonuclease; Belongs to the DNase I family. (304 aa)
	DNASE1	Deoxyribonuclease; Belongs to the DNase I family. (284 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APEX1	APEX2	A0A1U7SL62	A0A3Q0HG69	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	DNA-(Apurinic or apyrimidinic site) lyase 2 isoform X1.	0.920
APEX2	APEX1	A0A3Q0HG69	A0A1U7SL62	DNA-(Apurinic or apyrimidinic site) lyase 2 isoform X1.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.920
CNOT6	CNOT6L	A0A1U8D957	A0A3Q0GVY3	CCR4-NOT transcription complex subunit 6 isoform X1.	CCR4-NOT transcription complex subunit 6-like.	0.901
CNOT6L	CNOT6	A0A3Q0GVY3	A0A1U8D957	CCR4-NOT transcription complex subunit 6-like.	CCR4-NOT transcription complex subunit 6 isoform X1.	0.901
INPP5B	INPP5D	A0A3Q0HFQ8	A0A1U8DJ35	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1.	0.417
INPP5B	INPP5E	A0A3Q0HFQ8	A0A1U7RBH0	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	72 kDa inositol polyphosphate 5-phosphatase.	0.915
INPP5B	LOC102368100	A0A3Q0HFQ8	A0A1U7SN76	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	Type I inositol 1,4,5-trisphosphate 5-phosphatase-like.	0.422
INPP5B	OCRL	A0A3Q0HFQ8	A0A3Q0H2B5	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	0.951
INPP5B	SYNJ1	A0A3Q0HFQ8	A0A3Q0HE06	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	Synaptojanin-1.	0.949
INPP5B	SYNJ2	A0A3Q0HFQ8	A0A1U7RLZ3	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	Synaptojanin-2 isoform X1.	0.949
INPP5D	INPP5B	A0A1U8DJ35	A0A3Q0HFQ8	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1.	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	0.417
INPP5D	INPPL1	A0A1U8DJ35	A0A3Q0FUI7	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1.	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2.	0.934
INPP5D	LOC102375443	A0A1U8DJ35	A0A3Q0GBW7	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1.	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2-like isoform X1.	0.936
INPP5D	OCRL	A0A1U8DJ35	A0A3Q0H2B5	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1.	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	0.418
INPP5D	SYNJ1	A0A1U8DJ35	A0A3Q0HE06	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1.	Synaptojanin-1.	0.449
INPP5E	INPP5B	A0A1U7RBH0	A0A3Q0HFQ8	72 kDa inositol polyphosphate 5-phosphatase.	Type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3.	0.915
INPP5E	LOC102368100	A0A1U7RBH0	A0A1U7SN76	72 kDa inositol polyphosphate 5-phosphatase.	Type I inositol 1,4,5-trisphosphate 5-phosphatase-like.	0.513
INPP5E	OCRL	A0A1U7RBH0	A0A3Q0H2B5	72 kDa inositol polyphosphate 5-phosphatase.	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	0.915
INPP5E	SYNJ1	A0A1U7RBH0	A0A3Q0HE06	72 kDa inositol polyphosphate 5-phosphatase.	Synaptojanin-1.	0.936
INPP5E	SYNJ2	A0A1U7RBH0	A0A1U7RLZ3	72 kDa inositol polyphosphate 5-phosphatase.	Synaptojanin-2 isoform X1.	0.936