STRINGSTRING
USP5 USP5 LOC102374854 LOC102374854 TNRC6C TNRC6C SPATS2L SPATS2L LATS1 LATS1 FAF2 FAF2 VPS13D VPS13D UBASH3A UBASH3A TNK2 TNK2 RAD23B RAD23B USP25 USP25 HUWE1 HUWE1 USP28 USP28 ASCC2 ASCC2 SPATS2 SPATS2 NXF1 NXF1 UBXN1 UBXN1 UBAP2L UBAP2L N4BP2 N4BP2 UBE2K UBE2K CUEDC1 CUEDC1 SQSTM1 SQSTM1 UBAC2 UBAC2 CBL CBL DHX57 DHX57 UBQLN1 UBQLN1 TDRD3 TDRD3 LATS2 LATS2 SMARCAD1 SMARCAD1 UBALD2 UBALD2 NBR1 NBR1 RAD23A RAD23A RHBDD3 RHBDD3 UBAC1 UBAC1 USP13 USP13 UBL7 UBL7 NUB1 NUB1 DMRT3 DMRT3 CBLB CBLB TOLLIP TOLLIP TSFM TSFM UBQLN4 UBQLN4 UBAP1 UBAP1 UBAP2 UBAP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
USP5Ubiquitin carboxyl-terminal hydrolase. (809 aa)
LOC102374854Doublesex- and mab-3-related transcription factor A1 isoform X1. (289 aa)
TNRC6CTrinucleotide repeat-containing gene 6C protein isoform X1. (1976 aa)
SPATS2LSPATS2-like protein isoform X1. (554 aa)
LATS1Serine/threonine-protein kinase LATS1 isoform X1. (1138 aa)
FAF2FAS-associated factor 2 isoform X1. (466 aa)
VPS13DVacuolar protein sorting-associated protein 13D isoform X1. (4390 aa)
UBASH3AUbiquitin-associated and SH3 domain-containing protein A. (627 aa)
TNK2LOW QUALITY PROTEIN: activated CDC42 kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1110 aa)
RAD23BUV excision repair protein RAD23 homolog B isoform X1. (468 aa)
USP25Ubiquitin carboxyl-terminal hydrolase 25 isoform X1; Belongs to the peptidase C19 family. (1127 aa)
HUWE1LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HUWE1. (4398 aa)
USP28Ubiquitin carboxyl-terminal hydrolase 28 isoform X1; Belongs to the peptidase C19 family. (1137 aa)
ASCC2Activating signal cointegrator 1 complex subunit 2. (745 aa)
SPATS2Spermatogenesis-associated serine-rich protein 2 isoform X1. (564 aa)
NXF1Nuclear RNA export factor 1. (588 aa)
UBXN1UBX domain-containing protein 1. (208 aa)
UBAP2LLOW QUALITY PROTEIN: ubiquitin-associated protein 2-like. (1114 aa)
N4BP2NEDD4-binding protein 2 isoform X1. (1797 aa)
UBE2KUbiquitin-conjugating enzyme E2 K isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (197 aa)
CUEDC1LOW QUALITY PROTEIN: CUE domain-containing protein 1. (371 aa)
SQSTM1Sequestosome-1 isoform X1. (357 aa)
UBAC2Ubiquitin-associated domain-containing protein 2. (290 aa)
CBLE3 ubiquitin-protein ligase CBL isoform X1. (851 aa)
DHX57Putative ATP-dependent RNA helicase DHX57 isoform X1. (1384 aa)
UBQLN1Ubiquilin-1. (534 aa)
TDRD3Tudor domain-containing protein 3 isoform X1. (653 aa)
LATS2Non-specific serine/threonine protein kinase. (1127 aa)
SMARCAD1annotation not available (1027 aa)
UBALD2UBA-like domain-containing protein 2 isoform X1. (167 aa)
NBR1Next to BRCA1 gene 1 protein isoform X1. (1040 aa)
RAD23AUV excision repair protein RAD23 homolog A isoform X1. (363 aa)
RHBDD3Rhomboid domain-containing protein 3. (415 aa)
UBAC1Ubiquitin-associated domain-containing protein 1. (468 aa)
USP13Ubiquitin carboxyl-terminal hydrolase. (835 aa)
UBL7Ubiquitin-like protein 7. (380 aa)
NUB1NEDD8 ultimate buster 1 isoform X1. (646 aa)
DMRT3Doublesex- and mab-3-related transcription factor 3. (341 aa)
CBLBE3 ubiquitin-protein ligase CBL-B isoform X1. (976 aa)
TOLLIPToll-interacting protein isoform X1. (274 aa)
TSFMElongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (336 aa)
UBQLN4Ubiquilin-4. (596 aa)
UBAP1Ubiquitin-associated protein 1. (522 aa)
UBAP2Ubiquitin-associated protein 2 isoform X2. (1117 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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