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KPNA3 KPNA3 VPS29 VPS29 SEC13 SEC13 NUP107 NUP107 LOC102381047 LOC102381047 LOC102380799 LOC102380799 COPA COPA ARCN1 ARCN1 AP1M1 AP1M1 LOC102371683 LOC102371683 COPZ2 COPZ2 NUP35 NUP35 AP4M1 AP4M1 LOC102377904 LOC102377904 LOC102374573 LOC102374573 ATG9A ATG9A VPS37B VPS37B AP1S3 AP1S3 SEC23A SEC23A LOC102383202 LOC102383202 TOM1L2 TOM1L2 SEH1L SEH1L KPNA4 KPNA4 VPS37A VPS37A TIMM44 TIMM44 VPS37C VPS37C VPS37D VPS37D COPG2 COPG2 AP3M1 AP3M1 ATG4A ATG4A TIMM50 TIMM50 TRAM2 TRAM2 ATG7 ATG7 ATG4B ATG4B COPZ1 COPZ1 SAR1B SAR1B VPS11 VPS11 KPNA5 KPNA5 TIMM9 TIMM9 AP3M2 AP3M2 SEC24C SEC24C SEC61A1 SEC61A1 SEC16A SEC16A AP3S1 AP3S1 GOSR2 GOSR2 COPG1 COPG1 TOM1 TOM1 LIN7C LIN7C COG6 COG6 TOM1L1 TOM1L1 NUP85 NUP85 SEC24D SEC24D NMD3 NMD3 VPS41 VPS41 TIMM8A TIMM8A SEC24A SEC24A SEC61B SEC61B BBS7 BBS7 EXOC2 EXOC2 AP4S1 AP4S1 AP1B1 AP1B1 RAN RAN SEC61A2 SEC61A2 ATG4D ATG4D AP1S2 AP1S2 SFT2D2 SFT2D2 SAR1A SAR1A SNF8 SNF8 AP1M2 AP1M2 SNX5 SNX5 VPS35 VPS35 KPNA7 KPNA7 SEC24B SEC24B LOC102369829 LOC102369829 AP3D1 AP3D1 LOC102375336 LOC102375336 LOC102381531 LOC102381531 AP1G1 AP1G1 LOC102386811 LOC102386811 AP3B2 AP3B2 AP4E1 AP4E1 AP2M1 AP2M1 AP2A1 AP2A1 SERP2 SERP2 AP5M1 AP5M1 KDELR1 KDELR1 SDAD1 SDAD1 KPNA2 KPNA2 KPNA6 KPNA6 COPB1 COPB1 EXOC7 EXOC7 ATG3 ATG3 VPS16 VPS16 AP2S1 AP2S1 NUP93 NUP93 VPS28 VPS28 SEC23B SEC23B TIMM10 TIMM10 AP1S1 AP1S1 ATG4C ATG4C TIMM8B TIMM8B LOC102369408 LOC102369408 KDELR3 KDELR3 ENY2 ENY2 KPNA1 KPNA1 AP4B1 AP4B1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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KPNA3Importin subunit alpha; Belongs to the importin alpha family. (497 aa)
VPS29Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (202 aa)
SEC13Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (300 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (930 aa)
LOC102381047AP-2 complex subunit beta. (424 aa)
LOC102380799Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (116 aa)
COPACoatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1244 aa)
ARCN1Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (527 aa)
AP1M1AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (397 aa)
LOC102371683Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (1061 aa)
COPZ2Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (187 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (320 aa)
AP4M1LOW QUALITY PROTEIN: AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (464 aa)
LOC102377904Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (195 aa)
LOC102374573AP-3 complex subunit beta-1. (884 aa)
ATG9AAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (753 aa)
VPS37BVacuolar protein sorting-associated protein 37B. (267 aa)
AP1S3AP-1 complex subunit sigma-3. (257 aa)
SEC23AProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
LOC102383202AP-3 complex subunit beta-1-like isoform X1. (362 aa)
TOM1L2TOM1-like protein 2 isoform X1; Belongs to the TOM1 family. (496 aa)
SEH1LNucleoporin SEH1; Belongs to the WD repeat SEC13 family. (408 aa)
KPNA4Importin subunit alpha; Belongs to the importin alpha family. (560 aa)
VPS37AVacuolar protein sorting-associated protein 37A isoform X1. (333 aa)
TIMM44Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (422 aa)
VPS37CVacuolar protein sorting-associated protein 37C. (116 aa)
VPS37DVacuolar protein sorting-associated protein 37D isoform X1. (305 aa)
COPG2Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (907 aa)
AP3M1LOW QUALITY PROTEIN: AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (427 aa)
ATG4ACysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (468 aa)
TIMM50Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (280 aa)
TRAM2Translocating chain-associated membrane protein; Belongs to the TRAM family. (365 aa)
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (815 aa)
ATG4BCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (442 aa)
COPZ1Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (264 aa)
SAR1BGTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
VPS11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (877 aa)
KPNA5Importin subunit alpha; Belongs to the importin alpha family. (539 aa)
TIMM9Mitochondrial import inner membrane translocase subunit Tim9. (89 aa)
AP3M2LOW QUALITY PROTEIN: AP-3 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family. (393 aa)
SEC24CProtein transport protein Sec24C isoform X1. (1186 aa)
SEC61A1Protein transport protein Sec61 subunit alpha. (476 aa)
SEC16AProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2471 aa)
AP3S1AP-3 complex subunit sigma-1 isoform X1. (193 aa)
GOSR2Golgi SNAP receptor complex member 2 isoform X1; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
COPG1Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (874 aa)
TOM1Target of Myb protein 1 isoform X1; Belongs to the TOM1 family. (483 aa)
LIN7CProtein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (197 aa)
COG6Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (650 aa)
TOM1L1TOM1-like protein 1; Belongs to the TOM1 family. (457 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (650 aa)
SEC24DProtein transport protein Sec24D. (1038 aa)
NMD360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (503 aa)
VPS41Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (854 aa)
TIMM8AMitochondrial import inner membrane translocase subunit Tim8 A; Belongs to the small Tim family. (94 aa)
SEC24AProtein transport protein Sec24A isoform X1. (1101 aa)
SEC61BProtein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (96 aa)
BBS7Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (720 aa)
EXOC2Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (925 aa)
AP4S1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (144 aa)
AP1B1AP complex subunit beta. (958 aa)
RANGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
SEC61A2LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha. (474 aa)
ATG4DCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (446 aa)
AP1S2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)
SFT2D2Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (160 aa)
SAR1AGTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
SNF8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
AP1M2AP-1 complex subunit mu-2 isoform X1; Belongs to the adaptor complexes medium subunit family. (499 aa)
SNX5Sorting nexin; Involved in several stages of intracellular trafficking. (402 aa)
VPS35Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (804 aa)
KPNA7Importin subunit alpha; Belongs to the importin alpha family. (518 aa)
SEC24BProtein transport protein Sec24B. (1193 aa)
LOC102369829ER lumen protein-retaining receptor. (263 aa)
AP3D1AP-3 complex subunit delta-1 isoform X1. (1213 aa)
LOC102375336AP-2 complex subunit beta-like. (428 aa)
LOC102381531AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (957 aa)
AP1G1AP-1 complex subunit gamma. (823 aa)
LOC102386811Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (95 aa)
AP3B2AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1153 aa)
AP4E1AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family. (1085 aa)
AP2M1AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family. (437 aa)
AP2A1AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (969 aa)
SERP2Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (65 aa)
AP5M1AP-5 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family. (428 aa)
KDELR1ER lumen protein-retaining receptor. (217 aa)
SDAD1Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (687 aa)
KPNA2Importin subunit alpha; Belongs to the importin alpha family. (515 aa)
KPNA6Importin subunit alpha; Belongs to the importin alpha family. (564 aa)
COPB1Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (953 aa)
EXOC7Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (723 aa)
ATG3Autophagy-related protein 3. (314 aa)
VPS16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (813 aa)
AP2S1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
VPS28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (219 aa)
SEC23BProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (770 aa)
TIMM10Mitochondrial import inner membrane translocase subunit Tim10. (90 aa)
AP1S1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (187 aa)
ATG4CCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (459 aa)
TIMM8BMitochondrial import inner membrane translocase subunit Tim8 B; Belongs to the small Tim family. (85 aa)
LOC102369408Arpin-like. (311 aa)
KDELR3ER lumen protein-retaining receptor. (214 aa)
ENY2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
KPNA1Importin subunit alpha; Belongs to the importin alpha family. (538 aa)
AP4B1AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (600 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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