STRINGSTRING
RBMS3 RBMS3 NOL6 NOL6 CELF1 CELF1 RBM46 RBM46 LOC102371078 LOC102371078 PPRC1 PPRC1 NSUN3 NSUN3 RBM45 RBM45 GRSF1 GRSF1 NSUN5 NSUN5 DDX10 DDX10 RBM28 RBM28 LOC102369585 LOC102369585 LOC102381255 LOC102381255 RBM15B RBM15B CELF2 CELF2 SON SON CELF6 CELF6 LARP4 LARP4 TRMT2A TRMT2A EIF4B EIF4B RNPC3 RNPC3 RBM25 RBM25 SCAF8 SCAF8 ZNF638 ZNF638 DTD1 DTD1 RAVER2 RAVER2 RALY RALY CLUH CLUH MSI2 MSI2 RBM7 RBM7 SRSF1 SRSF1 CPEB3 CPEB3 RBM27 RBM27 ENOX2 ENOX2 PTBP3 PTBP3 EIF4H EIF4H LSM4 LSM4 SLIRP SLIRP TRA2A TRA2A SFPQ SFPQ NIFK NIFK HNRNPA0 HNRNPA0 HNRNPH1 HNRNPH1 CDKN2AIP CDKN2AIP RBM11 RBM11 U2SURP U2SURP CPSF6 CPSF6 GAR1 GAR1 DICER1 DICER1 U2AF2 U2AF2 RBM15 RBM15 RBM5 RBM5 THUMPD2 THUMPD2 PPARGC1A PPARGC1A RBFOX2 RBFOX2 THUMPD1 THUMPD1 REXO5 REXO5 NSUN4 NSUN4 SSB SSB LOC102381985 LOC102381985 LARP1B LARP1B ADARB2 ADARB2 DIMT1 DIMT1 TRMT1 TRMT1 EIF3G EIF3G IGF2BP1 IGF2BP1 RBM43 RBM43 ADAD1 ADAD1 LSM1 LSM1 NCL NCL RAVER1 RAVER1 RALYL RALYL SRSF4 SRSF4 RBM20 RBM20 LOC102368354 LOC102368354 LOC112550069 LOC112550069 RBM22 RBM22 ADARB1 ADARB1 SRP54 SRP54 EIF3A EIF3A STAU2 STAU2 RBMS1 RBMS1 PPARGC1B PPARGC1B LARP1 LARP1 MSI1 MSI1 ESRP1 ESRP1 SRSF9 SRSF9 RBPMS2 RBPMS2 YARS YARS SART3 SART3 LARP6 LARP6 PPIE PPIE SRSF10 SRSF10 ESRP2 ESRP2 ALKBH8 ALKBH8 DAZAP1 DAZAP1 SNRPB2 SNRPB2 DDX18 DDX18 LOC102372028 LOC102372028 CIRBP CIRBP LOC102379072 LOC102379072 SETD1A SETD1A EWSR1 EWSR1 TRMT1L TRMT1L STRBP STRBP UHMK1 UHMK1 RBFOX3 RBFOX3 HNRNPA1 HNRNPA1 NELFE NELFE STAU1 STAU1 RBM41 RBM41 LOC102382268 LOC102382268 RBM10 RBM10 RBPMS RBPMS NSUN7 NSUN7 NCOA5 NCOA5 CPEB1 CPEB1 RBMS2 RBMS2 CELF5 CELF5 FUS FUS SNRPB SNRPB HTATSF1 HTATSF1 XPOT XPOT LOC102371689 LOC102371689 SF3B4 SF3B4 U2AF1 U2AF1 CNP CNP RBM17 RBM17 SNRPE SNRPE TARBP2 TARBP2 HNRNPA3 HNRNPA3 NSUN6 NSUN6 DROSHA DROSHA IGF2BP3 IGF2BP3 HNRNPC HNRNPC RBM12 RBM12 TIA1 TIA1 AGO2 AGO2 DHX9 DHX9 TUT1 TUT1 HNRNPM HNRNPM DNAJC17 DNAJC17 RBM39 RBM39 CNOT4 CNOT4 RPS4X RPS4X RBFOX1 RBFOX1 LSM6 LSM6 ELAVL3 ELAVL3 SLTM SLTM ADAR ADAR ZRSR2 ZRSR2 RBM47 RBM47 RBM26 RBM26 SLFNL1 SLFNL1 SRSF5 SRSF5 AARS2 AARS2 AGO3 AGO3 PTBP2 PTBP2 NOL8 NOL8 LOC102377813 LOC102377813 SEPSECS SEPSECS SRSF6 SRSF6 LOC102388601 LOC102388601 RNPS1 RNPS1 DIS3L2 DIS3L2 DUS2 DUS2 NANOS1 NANOS1 EIF2AK2 EIF2AK2 ZRANB2 ZRANB2 ELAVL2 ELAVL2 NHP2 NHP2 POLDIP3 POLDIP3 HNRNPD HNRNPD BOLL BOLL LOC102386495 LOC102386495 TRA2B TRA2B CPSF2 CPSF2 RPL37 RPL37 IGF2BP2 IGF2BP2 HNRNPH3 HNRNPH3 HNRNPL HNRNPL ALYREF ALYREF PUF60 PUF60 RBM3 RBM3 PSPC1 PSPC1 LOC102376251 LOC102376251 METTL1 METTL1 TTC31 TTC31 DDX31 DDX31 PABPN1L PABPN1L EIF3B EIF3B AKAP17A AKAP17A EIF4E1B EIF4E1B SYNCRIP SYNCRIP HNRNPR HNRNPR HNRNPA2B1 HNRNPA2B1 AIMP1 AIMP1 RBM23 RBM23 SNRPG SNRPG AARS AARS DGCR8 DGCR8 AGO4 AGO4 CELF3 CELF3 HNRNPAB HNRNPAB LOC102369995 LOC102369995 SNRPC SNRPC RBMX RBMX SNRPF SNRPF PPIL4 PPIL4 RBM24 RBM24 SNRPA SNRPA TFB2M TFB2M MYEF2 MYEF2 DND1 DND1 NSUN2 NSUN2 LARP4B LARP4B RBM8A RBM8A RBMX2 RBMX2 PABPC1 PABPC1 EIF4E EIF4E RBM44 RBM44 CPEB4 CPEB4 CSTF2 CSTF2 G3BP1 G3BP1 EIF3D EIF3D RPS3 RPS3 LARP7 LARP7 KRR1 KRR1 SRSF3 SRSF3 NOP2 NOP2 THUMPD3 THUMPD3 ELAVL1 ELAVL1 MARF1 MARF1 DAZL DAZL RBM6 RBM6 SRSF7 SRSF7 LSM3 LSM3 LOC102388414 LOC102388414 PTBP1 PTBP1 G3BP2 G3BP2 SNU13 SNU13 SF3B6 SF3B6 RBM19 RBM19 TRNAU1AP TRNAU1AP TRNT1 TRNT1 SPEN SPEN ZCRB1 ZCRB1 MATR3 MATR3 LSM5 LSM5 CPSF7 CPSF7 TIAL1 TIAL1 PABPC1L PABPC1L TFB1M TFB1M SYNJ2 SYNJ2 NUDT21 NUDT21 RBM12B RBM12B HNRNPLL HNRNPLL NONO NONO DDX55 DDX55 RNMT RNMT LSM8 LSM8 ILF3 ILF3 LOC102377241 LOC102377241 A1CF A1CF PABPC4 PABPC4 MTHFSD MTHFSD RBM18 RBM18 DDX54 DDX54 CPEB2 CPEB2 RDM1 RDM1 LOC102369289 LOC102369289 EIF4E2 EIF4E2 SNRNP70 SNRNP70 RBM34 RBM34 RPS9 RPS9 EIF4E3 EIF4E3 ENOX1 ENOX1 TARDBP TARDBP SETD1B SETD1B SNRNP35 SNRNP35
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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RBMS3RNA-binding motif, single-stranded-interacting protein 3 isoform X1. (451 aa)
NOL6Nucleolar protein 6. (1213 aa)
CELF1CUGBP Elav-like family member 1 isoform X1. (516 aa)
RBM46Probable RNA-binding protein 46 isoform X1. (472 aa)
LOC102371078Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (681 aa)
PPRC1Peroxisome proliferator-activated receptor gamma coactivator-related protein 1. (1508 aa)
NSUN3tRNA (Cytosine(34)-C(5))-methyltransferase, mitochondrial; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (421 aa)
RBM45RNA-binding protein 45 isoform X1. (351 aa)
GRSF1G-rich sequence factor 1 isoform X1. (379 aa)
NSUN5Probable 28S rRNA (Cytosine-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (400 aa)
DDX10RNA helicase. (822 aa)
RBM28RNA-binding protein 28. (726 aa)
LOC102369585RNA-binding protein 14. (694 aa)
LOC102381255RNA-binding protein 4B isoform X1. (364 aa)
RBM15BPutative RNA-binding protein 15B. (757 aa)
CELF2CUGBP Elav-like family member 2 isoform X1. (552 aa)
SONProtein SON isoform X1. (3212 aa)
CELF6CUGBP Elav-like family member 6. (460 aa)
LARP4La-related protein 4 isoform X1. (744 aa)
TRMT2AtRNA (Uracil-5-)-methyltransferase homolog A isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (613 aa)
EIF4BLOW QUALITY PROTEIN: eukaryotic translation initiation factor 4B. (630 aa)
RNPC3RNA-binding protein 40. (715 aa)
RBM25RNA-binding protein 25 isoform X1. (856 aa)
SCAF8LOW QUALITY PROTEIN: protein SCAF8. (1354 aa)
ZNF638LOW QUALITY PROTEIN: zinc finger protein 638. (2329 aa)
DTD1D-aminoacyl-tRNA deacylase. (308 aa)
RAVER2Ribonucleoprotein PTB-binding 2. (761 aa)
RALYRNA-binding protein Raly isoform X1. (320 aa)
CLUHClustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. Specifically binds mRNAs of nuclear- encoded mitochondrial proteins in the cytoplasm and regulates transport or translation of these transcripts close to mitochondria, playing a role in mitochondrial biogenesis; Belongs to the CLU family. (1605 aa)
MSI2RNA-binding protein Musashi homolog 2 isoform X1. (420 aa)
RBM7RNA-binding protein 7 isoform X1. (295 aa)
SRSF1LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 1. (241 aa)
CPEB3Cytoplasmic polyadenylation element-binding protein 3. (630 aa)
RBM27RNA-binding protein 27 isoform X1. (1047 aa)
ENOX2ecto-NOX disulfide-thiol exchanger 2 isoform X1. (681 aa)
PTBP3Polypyrimidine tract-binding protein 3 isoform X1. (564 aa)
EIF4HEukaryotic translation initiation factor 4H. (239 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (124 aa)
SLIRPSRA stem-loop-interacting RNA-binding protein, mitochondrial isoform X1. (123 aa)
TRA2ATransformer-2 protein homolog alpha isoform X1. (199 aa)
SFPQSplicing factor, proline- and glutamine-rich. (460 aa)
NIFKMKI67 FHA domain-interacting nucleolar phosphoprotein. (271 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (124 aa)
HNRNPH1Heterogeneous nuclear ribonucleoprotein H isoform X1. (392 aa)
CDKN2AIPCDKN2A-interacting protein. (830 aa)
RBM11Splicing regulator RBM11 isoform X1. (272 aa)
U2SURPU2 snRNP-associated SURP motif-containing protein isoform X3. (1108 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6 isoform X1. (531 aa)
GAR1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (281 aa)
DICER1LOW QUALITY PROTEIN: endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. (1916 aa)
U2AF2Splicing factor U2AF 65 kDa subunit isoform X1. (775 aa)
RBM15Putative RNA-binding protein 15. (661 aa)
RBM5RNA-binding protein 5 isoform X1. (890 aa)
THUMPD2THUMP domain-containing protein 2 isoform X1. (424 aa)
PPARGC1APeroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1. (810 aa)
RBFOX2RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (391 aa)
THUMPD1THUMP domain-containing protein 1. (294 aa)
REXO5RNA exonuclease 5. (801 aa)
NSUN45-methylcytosine rRNA methyltransferase NSUN4 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (329 aa)
SSBLupus La protein. (409 aa)
LOC102381985tRNA selenocysteine 1-associated protein 1 isoform X1. (282 aa)
LARP1BLa-related protein 1B isoform X1. (962 aa)
ADARB2Double-stranded RNA-specific editase B2. (745 aa)
DIMT1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (333 aa)
TRMT1tRNA (Guanine(26)-N(2))-dimethyltransferase isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (721 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (382 aa)
IGF2BP1Insulin-like growth factor 2 mRNA-binding protein 1. (523 aa)
RBM43RNA-binding protein 43 isoform X1. (361 aa)
ADAD1Adenosine deaminase domain-containing protein 1 isoform X1. (597 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (159 aa)
NCLNucleolin. (664 aa)
RAVER1Ribonucleoprotein PTB-binding 1. (746 aa)
RALYLRNA-binding Raly-like protein isoform X2. (293 aa)
SRSF4Serine/arginine-rich splicing factor 4. (486 aa)
RBM20RNA-binding protein 20 isoform X1. (1227 aa)
LOC102368354CUGBP Elav-like family member 4 isoform X4. (502 aa)
LOC112550069Coiled-coil domain-containing protein 157-like. (454 aa)
RBM22pre-mRNA-splicing factor RBM22 isoform X1. (432 aa)
ADARB1Double-stranded RNA-specific editase 1 isoform X1. (748 aa)
SRP54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1529 aa)
STAU2Double-stranded RNA-binding protein Staufen homolog 2 isoform X1. (709 aa)
RBMS1RNA-binding motif, single-stranded-interacting protein 1 isoform X3. (388 aa)
PPARGC1BPeroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1. (1022 aa)
LARP1La-related protein 1 isoform X1. (923 aa)
MSI1RNA-binding protein Musashi homolog 1. (300 aa)
ESRP1Epithelial splicing regulatory protein 1. (590 aa)
SRSF9LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 9. (278 aa)
RBPMS2RNA-binding protein with multiple splicing 2 isoform X1. (211 aa)
YARSTyrosine--tRNA ligase. (470 aa)
SART3Squamous cell carcinoma antigen recognized by T-cells 3. (950 aa)
LARP6La-related protein 6. (370 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E isoform X1. (340 aa)
SRSF10LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 10. (345 aa)
ESRP2LOW QUALITY PROTEIN: epithelial splicing regulatory protein 2. (732 aa)
ALKBH8Alkylated DNA repair protein alkB homolog 8. (677 aa)
DAZAP1DAZ-associated protein 1 isoform X1. (418 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'' isoform X1. (264 aa)
DDX18RNA helicase. (656 aa)
LOC102372028Scaffold attachment factor B1-like isoform X1. (855 aa)
CIRBPCold-inducible RNA-binding protein isoform X1. (173 aa)
LOC102379072RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (360 aa)
SETD1AHistone-lysine N-methyltransferase SETD1A. (1308 aa)
EWSR1RNA-binding protein EWS isoform X1. (660 aa)
TRMT1LTRMT1-like protein isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (737 aa)
STRBPSpermatid perinuclear RNA-binding protein isoform X1. (673 aa)
UHMK1Serine/threonine-protein kinase Kist isoform X1. (366 aa)
RBFOX3RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (370 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1. (321 aa)
NELFENegative elongation factor E. (347 aa)
STAU1Double-stranded RNA-binding protein Staufen homolog 1 isoform X1. (707 aa)
RBM41RNA-binding protein 41. (445 aa)
LOC102382268Polyadenylate-binding protein 2. (177 aa)
RBM10RNA-binding protein 10 isoform X1. (948 aa)
RBPMSRNA-binding protein with multiple splicing isoform X1. (212 aa)
NSUN7Putative methyltransferase NSUN7 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (744 aa)
NCOA5Nuclear receptor coactivator 5 isoform X1. (719 aa)
CPEB1Cytoplasmic polyadenylation element-binding protein 1 isoform X2. (599 aa)
RBMS2RNA-binding motif, single-stranded-interacting protein 2. (456 aa)
CELF5CUGBP Elav-like family member 5 isoform X2. (402 aa)
FUSRNA-binding protein FUS. (517 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (245 aa)
HTATSF1HIV Tat-specific factor 1. (430 aa)
XPOTExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (966 aa)
LOC102371689RNA-binding protein 42. (283 aa)
SF3B4Splicing factor 3B subunit 4. (438 aa)
U2AF1Splicing factor U2AF 35 kDa subunit. (233 aa)
CNP2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family. (403 aa)
RBM17Splicing factor 45 isoform X1. (403 aa)
SNRPESmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (108 aa)
TARBP2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (373 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3 isoform X1. (417 aa)
NSUN6Putative methyltransferase NSUN6 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (468 aa)
DROSHARibonuclease 3 isoform X1. (1338 aa)
IGF2BP3Insulin-like growth factor 2 mRNA-binding protein 3. (435 aa)
HNRNPCHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (306 aa)
RBM12RNA-binding protein 12. (877 aa)
TIA1Nucleolysin TIA-1 isoform X1. (347 aa)
AGO2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (814 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1209 aa)
TUT1Speckle targeted PIP5K1A-regulated poly(A) polymerase. (741 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M isoform X1. (634 aa)
DNAJC17dnaJ homolog subfamily C member 17 isoform X1. (310 aa)
RBM39RNA-binding protein 39. (522 aa)
CNOT4CCR4-NOT transcription complex subunit 4 isoform X1. (765 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (294 aa)
RBFOX1RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (433 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (80 aa)
ELAVL3ELAV-like protein; Belongs to the RRM elav family. (331 aa)
SLTMLOW QUALITY PROTEIN: SAFB-like transcription modulator. (1066 aa)
ADARDouble-stranded RNA-specific adenosine deaminase isoform X1. (1202 aa)
ZRSR2U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (459 aa)
RBM47LOW QUALITY PROTEIN: RNA-binding protein 47. (588 aa)
RBM26RNA-binding protein 26 isoform X1. (1013 aa)
SLFNL1Schlafen-like protein 1. (338 aa)
SRSF5Serine/arginine-rich splicing factor 5 isoform X1. (264 aa)
AARS2LOW QUALITY PROTEIN: alanine--tRNA ligase, mitochondrial; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (910 aa)
AGO3Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (851 aa)
PTBP2Polypyrimidine tract-binding protein 2 isoform X1. (506 aa)
NOL8LOW QUALITY PROTEIN: nucleolar protein 8. (1189 aa)
LOC102377813Serine/arginine-rich splicing factor 7-like isoform X1. (223 aa)
SEPSECSO-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. (492 aa)
SRSF6Serine/arginine-rich splicing factor 6. (287 aa)
LOC102388601Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (95 aa)
RNPS1RNA-binding protein with serine-rich domain 1. (307 aa)
DIS3L2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (1131 aa)
DUS2tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1. (491 aa)
NANOS1Nanos homolog 1; Belongs to the nanos family. (163 aa)
EIF2AK2Interferon-induced, double-stranded RNA-activated protein kinase. (536 aa)
ZRANB2Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (343 aa)
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (387 aa)
NHP2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X1. (417 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D0. (257 aa)
BOLLProtein boule-like. (286 aa)
LOC102386495RNA-binding protein 4B-like. (108 aa)
TRA2BTransformer-2 protein homolog beta. (280 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
IGF2BP2Insulin-like growth factor 2 mRNA-binding protein 2 isoform X1. (532 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3 isoform X1. (344 aa)
HNRNPLLOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein L. (460 aa)
ALYREFTHO complex subunit 4. (161 aa)
PUF60poly(U)-binding-splicing factor PUF60. (536 aa)
RBM3RNA-binding protein 3. (151 aa)
PSPC1Paraspeckle component 1. (518 aa)
LOC102376251TATA-binding protein-associated factor 2N isoform X1. (484 aa)
METTL1tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (271 aa)
TTC31Tetratricopeptide repeat protein 31. (623 aa)
DDX31RNA helicase. (692 aa)
PABPN1LEmbryonic polyadenylate-binding protein 2. (249 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (776 aa)
AKAP17AA-kinase anchor protein 17A isoform X1. (684 aa)
EIF4E1BEukaryotic translation initiation factor 4E type 1B; Belongs to the eukaryotic initiation factor 4E family. (218 aa)
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X1. (623 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (633 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoproteins A2/B1. (366 aa)
AIMP1Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2. (319 aa)
RBM23Probable RNA-binding protein 23 isoform X1. (425 aa)
SNRPGSmall nuclear ribonucleoprotein G. (76 aa)
AARSLOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (968 aa)
DGCR8Microprocessor complex subunit DGCR8. (784 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (794 aa)
CELF3CUGBP Elav-like family member 3. (455 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (262 aa)
LOC102369995ELAV-like protein; Belongs to the RRM elav family. (402 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
RBMXRNA-binding motif protein, X chromosome isoform X1. (386 aa)
SNRPFSmall nuclear ribonucleoprotein F. (86 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (484 aa)
RBM24RNA-binding protein 24. (227 aa)
SNRPALOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein A. (243 aa)
TFB2MrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (315 aa)
MYEF2Myelin expression factor 2. (671 aa)
DND1Dead end protein homolog 1 isoform X1. (339 aa)
NSUN2LOW QUALITY PROTEIN: tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (810 aa)
LARP4BLa-related protein 4B isoform X1. (725 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
RBMX2RNA-binding motif protein, X-linked 2. (311 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (212 aa)
RBM44RNA-binding protein 44 isoform X1. (1005 aa)
CPEB4Cytoplasmic polyadenylation element-binding protein 4. (704 aa)
CSTF2Cleavage stimulation factor subunit 2 isoform X1. (589 aa)
G3BP1Ras GTPase-activating protein-binding protein 1 isoform X2. (472 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (573 aa)
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)
LARP7La-related protein 7. (593 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)
SRSF3Serine/arginine-rich splicing factor 3. (164 aa)
NOP2Probable 28S rRNA (Cytosine(4447)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (677 aa)
THUMPD3THUMP domain-containing protein 3. (481 aa)
ELAVL1ELAV-like protein; Belongs to the RRM elav family. (326 aa)
MARF1Meiosis regulator and mRNA stability factor 1 isoform X1. (1741 aa)
DAZLDeleted in azoospermia-like isoform X1. (290 aa)
RBM6RNA-binding protein 6 isoform X1. (1154 aa)
SRSF7Serine/arginine-rich splicing factor 7 isoform X1. (250 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
LOC102388414Scaffold attachment factor B1 isoform X1. (889 aa)
PTBP1Polypyrimidine tract-binding protein 1. (527 aa)
G3BP2Ras GTPase-activating protein-binding protein 2 isoform X1. (482 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
RBM19Probable RNA-binding protein 19 isoform X1. (944 aa)
TRNAU1APtRNA selenocysteine 1-associated protein 1. (355 aa)
TRNT1CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (437 aa)
SPENLOW QUALITY PROTEIN: msx2-interacting protein. (3561 aa)
ZCRB1Zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X1. (216 aa)
MATR3Matrin-3 isoform X1. (901 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
CPSF7Cleavage and polyadenylation specificity factor subunit 7. (462 aa)
TIAL1Nucleolysin TIAR isoform X1. (360 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (634 aa)
TFB1MrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (347 aa)
SYNJ2Synaptojanin-2 isoform X1. (1459 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
RBM12BRNA-binding protein 12B. (702 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L-like. (437 aa)
NONOnon-POU domain-containing octamer-binding protein. (460 aa)
DDX55RNA helicase. (554 aa)
RNMTmRNA cap guanine-N7 methyltransferase. (412 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
ILF3Interleukin enhancer-binding factor 3 isoform X1. (906 aa)
LOC102377241La-related protein 6-like. (480 aa)
A1CFAPOBEC1 complementation factor isoform X1. (590 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (630 aa)
MTHFSDMethenyltetrahydrofolate synthase domain-containing protein isoform X1. (410 aa)
RBM18Probable RNA-binding protein 18. (160 aa)
DDX54ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (806 aa)
CPEB2Cytoplasmic polyadenylation element-binding protein 2 isoform X1. (425 aa)
RDM1RAD52 motif-containing protein 1 isoform X1. (275 aa)
LOC102369289Uncharacterized protein LOC102369289. (1152 aa)
EIF4E2Eukaryotic translation initiation factor 4E type 2 isoform X1; Belongs to the eukaryotic initiation factor 4E family. (236 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (448 aa)
RBM34RNA-binding protein 34. (429 aa)
RPS940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
EIF4E3Eukaryotic translation initiation factor 4E type 3; Belongs to the eukaryotic initiation factor 4E family. (172 aa)
ENOX1ecto-NOX disulfide-thiol exchanger 1 isoform X1. (623 aa)
TARDBPTAR DNA-binding protein 43. (414 aa)
SETD1BHistone-lysine N-methyltransferase SETD1B isoform X1. (2008 aa)
SNRNP35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (269 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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