20 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GNA11	Guanine nucleotide-binding protein subunit alpha-11 isoform X1. (357 aa)
	GNGT2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (69 aa)
	PDYN	proenkephalin-B. (252 aa)
	LOC102385776	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (128 aa)
	POMC	Pro-opiomelanocortin. (261 aa)
	GNG13	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13. (67 aa)
	GNG12	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
	LOC102372061	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
	GNG2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (93 aa)
	GNB4	Guanine nucleotide-binding protein subunit beta-4. (340 aa)
	GNA15	Guanine nucleotide-binding protein subunit alpha-15 isoform X1. (396 aa)
	GNG4	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (74 aa)
	OPRM1	Mu-type opioid receptor; Belongs to the G-protein coupled receptor 1 family. (300 aa)
	GNB5	Guanine nucleotide-binding protein subunit beta-5 isoform X1. (353 aa)
	LOC102386960	Guanine nucleotide-binding protein subunit alpha-14. (237 aa)
	GNG7	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (68 aa)
	LOC102388376	Guanine nucleotide-binding protein G(Q) subunit alpha isoform X1. (333 aa)
	SNX19	Sorting nexin-19 isoform X1. (1003 aa)
	GNB1	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1. (340 aa)
	GNG5	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (43 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNA11	GNA15	A0A1U7RNK2	A0A3Q0FY91	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit alpha-15 isoform X1.	0.437
GNA11	GNB1	A0A1U7RNK2	A0A3Q0HAC8	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.814
GNA11	GNB4	A0A1U7RNK2	A0A3Q0G149	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit beta-4.	0.814
GNA11	GNB5	A0A1U7RNK2	A0A1U7RDG9	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit beta-5 isoform X1.	0.742
GNA11	GNG12	A0A1U7RNK2	A0A1U7S8Y2	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.631
GNA11	GNG13	A0A1U7RNK2	A0A1U8DEI1	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.	0.724
GNA11	GNG2	A0A1U7RNK2	A0A3Q0GM28	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.674
GNA11	GNG4	A0A1U7RNK2	A0A3Q0HGF5	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.674
GNA11	GNG5	A0A1U7RNK2	A0A3Q0H5H4	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.634
GNA11	GNG7	A0A1U7RNK2	A0A1U8DQM5	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.627
GNA11	GNGT2	A0A1U7RNK2	A0A1U7RST2	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.627
GNA11	LOC102372061	A0A1U7RNK2	A0A1U7S7Y9	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.580
GNA11	LOC102385776	A0A1U7RNK2	A0A3Q0GYD3	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.632
GNA11	LOC102388376	A0A1U7RNK2	A0A1U7S7A1	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Guanine nucleotide-binding protein G(Q) subunit alpha isoform X1.	0.900
GNA11	OPRM1	A0A1U7RNK2	A0A1U8DPV9	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Mu-type opioid receptor; Belongs to the G-protein coupled receptor 1 family.	0.472
GNA11	POMC	A0A1U7RNK2	A0A1U7SW33	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	Pro-opiomelanocortin.	0.509
GNA15	GNA11	A0A3Q0FY91	A0A1U7RNK2	Guanine nucleotide-binding protein subunit alpha-15 isoform X1.	Guanine nucleotide-binding protein subunit alpha-11 isoform X1.	0.437
GNA15	GNB1	A0A3Q0FY91	A0A3Q0HAC8	Guanine nucleotide-binding protein subunit alpha-15 isoform X1.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.752
GNA15	GNB4	A0A3Q0FY91	A0A3Q0G149	Guanine nucleotide-binding protein subunit alpha-15 isoform X1.	Guanine nucleotide-binding protein subunit beta-4.	0.752
GNA15	GNB5	A0A3Q0FY91	A0A1U7RDG9	Guanine nucleotide-binding protein subunit alpha-15 isoform X1.	Guanine nucleotide-binding protein subunit beta-5 isoform X1.	0.742