STRINGSTRING
MARCO MARCO HSP90B1 HSP90B1 MASP1 MASP1 SCARA5 SCARA5 APOB APOB LOC102384651 LOC102384651 CALR3 CALR3 LOC102386157 LOC102386157 COLEC11 COLEC11 APOE APOE CALR CALR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MARCOMacrophage receptor MARCO. (547 aa)
HSP90B1Endoplasmin. (427 aa)
MASP1Mannan-binding lectin serine protease 1 isoform X1; Belongs to the peptidase S1 family. (787 aa)
SCARA5Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways. (491 aa)
APOBApolipoprotein B-100. (3654 aa)
LOC102384651Apolipoprotein B-100-like. (991 aa)
CALR3Calreticulin. (442 aa)
LOC102386157Endoplasmin-like. (369 aa)
COLEC11Collectin-11 isoform X1. (277 aa)
APOEApolipoprotein E isoform X1. (252 aa)
CALRCalreticulin. (412 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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