STRINGSTRING
RAD23B RAD23B JOSD2 JOSD2 ASPDH ASPDH UBA52 UBA52 PRKN PRKN SPATA5L1 SPATA5L1 KXD1 KXD1 JOSD1 JOSD1 RAD23A RAD23A UBC UBC RPS27A RPS27A SPATA5 SPATA5 VCP VCP ATXN3 ATXN3 UBB UBB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAD23BUV excision repair protein RAD23 homolog B isoform X1. (468 aa)
JOSD2Josephin-2 isoform X1. (233 aa)
ASPDHPutative L-aspartate dehydrogenase. (299 aa)
UBA52ubiquitin-60S ribosomal protein L40. (104 aa)
PRKNRBR-type E3 ubiquitin transferase. (504 aa)
SPATA5L1Spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family. (628 aa)
KXD1kxDL motif-containing protein 1. (176 aa)
JOSD1Josephin-1. (202 aa)
RAD23AUV excision repair protein RAD23 homolog A isoform X1. (363 aa)
UBCpolyubiquitin-C. (381 aa)
RPS27Aubiquitin-40S ribosomal protein S27a. (156 aa)
SPATA5Spermatogenesis-associated protein 5 isoform X1. (831 aa)
VCPTransitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (761 aa)
ATXN3Ataxin-3 isoform X1. (381 aa)
UBBpolyubiquitin-B. (233 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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