STRINGSTRING
RPS25 RPS25 RPL6 RPL6 RPL13A RPL13A RPS9 RPS9 RPL8 RPL8 RPL7 RPL7 RPS14 RPS14 RPS15 RPS15 RPS8 RPS8 RPL22L1 RPL22L1 RPS3A RPS3A RPL15 RPL15 RPL7L1 RPL7L1 RPL27 RPL27 LOC102380257 LOC102380257 RPL35 RPL35 RPLP0 RPLP0 RPS21 RPS21 EIF3I EIF3I RPL26L1 RPL26L1 RPL18 RPL18 RPS3 RPS3 RPL13 RPL13 EIF3L EIF3L EIF3D EIF3D RPL23 RPL23 RPL12 RPL12 RPL9 RPL9 RPL32 RPL32 RPL37A RPL37A RPS10 RPS10 RPL10 RPL10 RPS13 RPS13 LOC102375173 LOC102375173 LOC102377507 LOC102377507 RPS20 RPS20 EIF3J EIF3J EIF3M EIF3M EIF3B EIF3B KXD1 KXD1 LOC102369615 LOC102369615 RPL21 RPL21 RPL7A RPL7A RPS27 RPS27 RPL3 RPL3 EIF3H EIF3H RPS6 RPS6 RPSA RPSA RPL34 RPL34 RPL37 RPL37 RPS18 RPS18 EIF3E EIF3E RPS7 RPS7 RPS12 RPS12 RPS15A RPS15A RPL24 RPL24 RPL31 RPL31 RPL18A RPL18A ARL6IP1 ARL6IP1 RPS26 RPS26 RPS11 RPS11 RPS29 RPS29 LOC106721859 LOC106721859 RPL19 RPL19 RPL3L RPL3L AKNAD1 AKNAD1 RPL4 RPL4 RPL11 RPL11 RPL28 RPL28 EIF3K EIF3K RPS4X RPS4X RPL38 RPL38 RPL30 RPL30 RPL23A RPL23A LOC102373205 LOC102373205 RPS5 RPS5 LOC102378834 LOC102378834 LOC102376651 LOC102376651 RPS17 RPS17 RPL36 RPL36 RPS19 RPS19 LOC102379089 LOC102379089 LOC102386565 LOC102386565 RPS24 RPS24 LOC102370527 LOC102370527 RSAD1 RSAD1 EIF3A EIF3A RPL5 RPL5 RPS16 RPS16 RPL35A RPL35A RPS2 RPS2 EIF3G EIF3G RPL22 RPL22 RPS28 RPS28 MRNIP MRNIP RPS27L RPS27L RPL39 RPL39 EIF3F EIF3F RSRC1 RSRC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (95 aa)
RPL660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (264 aa)
RPL13A60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (203 aa)
RPS940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
RPL860S ribosomal protein L8. (257 aa)
RPL7LOW QUALITY PROTEIN: 60S ribosomal protein L7. (253 aa)
RPS1440S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
RPS1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (193 aa)
RPL22L160S ribosomal protein L22-like 1. (121 aa)
RPS3A40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
RPL15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
RPL7L160S ribosomal protein L7-like 1. (247 aa)
RPL2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
LOC10238025760S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
RPL3560S ribosomal protein L35. (86 aa)
RPLP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (314 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
EIF3IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (329 aa)
RPL26L160S ribosomal protein L26-like 1. (145 aa)
RPL1860S ribosomal protein L18. (188 aa)
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)
RPL1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
EIF3LEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (564 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (573 aa)
RPL2360S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
RPL1260S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
RPL960S ribosomal protein L9. (192 aa)
RPL3260S ribosomal protein L32. (135 aa)
RPL37A60S ribosomal protein L37a. (107 aa)
RPS1040S ribosomal protein S10. (165 aa)
RPL1060S ribosomal protein L10. (215 aa)
RPS1340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (134 aa)
LOC10237517340S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
LOC10237750760S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)
RPS2040S ribosomal protein S20. (119 aa)
EIF3JEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (218 aa)
EIF3MEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (374 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (776 aa)
KXD1kxDL motif-containing protein 1. (176 aa)
LOC102369615Olfactory receptor. (317 aa)
RPL2160S ribosomal protein L21. (160 aa)
RPL7A60S ribosomal protein L7a. (266 aa)
RPS2740S ribosomal protein S27. (84 aa)
RPL360S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (403 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (344 aa)
RPS640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (296 aa)
RPL3460S ribosomal protein L34. (117 aa)
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
RPS1840S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (445 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
RPS1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (114 aa)
RPS15A40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
RPL2460S ribosomal protein L24. (157 aa)
RPL3160S ribosomal protein L31. (125 aa)
RPL18A60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
ARL6IP1ADP-ribosylation factor-like protein 6-interacting protein 1. (203 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
RPS1140S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (151 aa)
RPS29LOW QUALITY PROTEIN: 40S ribosomal protein S29. (47 aa)
LOC106721859Uncharacterized protein At2g34460, chloroplastic-like. (220 aa)
RPL1960S ribosomal protein L19. (121 aa)
RPL3L60S ribosomal protein L3-like isoform X1; Belongs to the universal ribosomal protein uL3 family. (440 aa)
AKNAD1Protein AKNAD1 isoform X1. (1045 aa)
RPL460S ribosomal protein L4. (480 aa)
RPL1160S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (167 aa)
RPL2860S ribosomal protein L28. (137 aa)
EIF3KEukaryotic translation initiation factor 3 subunit K. (131 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (294 aa)
RPL3860S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
RPL3060S ribosomal protein L30. (117 aa)
RPL23A60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (95 aa)
LOC102373205Olfactory receptor. (287 aa)
RPS540S ribosomal protein S5. (129 aa)
LOC102378834Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (154 aa)
LOC10237665140S ribosomal protein S23-like; Belongs to the universal ribosomal protein uS12 family. (142 aa)
RPS1740S ribosomal protein S17. (233 aa)
RPL3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (82 aa)
RPS1940S ribosomal protein S19. (165 aa)
LOC102379089Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1127 aa)
LOC10238656560S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
RPS2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
LOC102370527LOW QUALITY PROTEIN: 60S ribosomal protein L27a. (152 aa)
RSAD1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (502 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1529 aa)
RPL560S ribosomal protein L5. (314 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (164 aa)
RPL35A60S ribosomal protein L35a isoform X1. (135 aa)
RPS240S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (239 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (382 aa)
RPL2260S ribosomal protein L22. (95 aa)
RPS2840S ribosomal protein S28. (55 aa)
MRNIPMRN complex-interacting protein. (404 aa)
RPS27L40S ribosomal protein S27. (89 aa)
RPL3960S ribosomal protein L39. (135 aa)
EIF3FEukaryotic translation initiation factor 3 subunit F; Belongs to the eIF-3 subunit F family. (235 aa)
RSRC1serine/Arginine-related protein 53. (331 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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