STRINGSTRING
EIF4B EIF4B EIF3D EIF3D EIF4E EIF4E RPS10 RPS10 EIF2S2 EIF2S2 RPS13 RPS13 LOC102375173 LOC102375173 RPS20 RPS20 EIF3J EIF3J EIF3M EIF3M RSRC1 RSRC1 EIF4E1B EIF4E1B EIF3B EIF3B RPS27 RPS27 EIF3H EIF3H EIF3F EIF3F EIF4A1 EIF4A1 RPS6 RPS6 RPSA RPSA RPS18 RPS18 EIF3E EIF3E RPS7 RPS7 RPS12 RPS12 RPS15A RPS15A ARL6IP1 ARL6IP1 RPS26 RPS26 RPS11 RPS11 RPS29 RPS29 LOC102380618 LOC102380618 EIF2S3 EIF2S3 LOC106721859 LOC106721859 EIF3K EIF3K RPS4X RPS4X RPS25 RPS25 RPS5 RPS5 LOC102378834 LOC102378834 LOC102376651 LOC102376651 RPS17 RPS17 RPS19 RPS19 LOC102379089 LOC102379089 RPS24 RPS24 RSAD1 RSAD1 EIF3A EIF3A RPS16 RPS16 RPS2 RPS2 EIF3G EIF3G LOC102373610 LOC102373610 RPS28 RPS28 MRNIP MRNIP EIF4H EIF4H RPS27L RPS27L RPS9 RPS9 RPS14 RPS14 RPS15 RPS15 RPS8 RPS8 EIF5 EIF5 RPS3A RPS3A EIF2S1 EIF2S1 EIF4A2 EIF4A2 RPS21 RPS21 EIF3I EIF3I RPS3 RPS3 EIF3L EIF3L
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EIF4BLOW QUALITY PROTEIN: eukaryotic translation initiation factor 4B. (630 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (573 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (212 aa)
RPS1040S ribosomal protein S10. (165 aa)
EIF2S2Eukaryotic translation initiation factor 2 subunit 2. (334 aa)
RPS1340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (134 aa)
LOC10237517340S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
RPS2040S ribosomal protein S20. (119 aa)
EIF3JEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (218 aa)
EIF3MEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (374 aa)
RSRC1serine/Arginine-related protein 53. (331 aa)
EIF4E1BEukaryotic translation initiation factor 4E type 1B; Belongs to the eukaryotic initiation factor 4E family. (218 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (776 aa)
RPS2740S ribosomal protein S27. (84 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (344 aa)
EIF3FEukaryotic translation initiation factor 3 subunit F; Belongs to the eIF-3 subunit F family. (235 aa)
EIF4A1Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family. (406 aa)
RPS640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (296 aa)
RPS1840S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (445 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
RPS1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (114 aa)
RPS15A40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
ARL6IP1ADP-ribosylation factor-like protein 6-interacting protein 1. (203 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
RPS1140S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (151 aa)
RPS29LOW QUALITY PROTEIN: 40S ribosomal protein S29. (47 aa)
LOC102380618Eukaryotic translation initiation factor 2 subunit 3. (120 aa)
EIF2S3Eukaryotic translation initiation factor 2 subunit 3. (363 aa)
LOC106721859Uncharacterized protein At2g34460, chloroplastic-like. (220 aa)
EIF3KEukaryotic translation initiation factor 3 subunit K. (131 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (294 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (95 aa)
RPS540S ribosomal protein S5. (129 aa)
LOC102378834Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (154 aa)
LOC10237665140S ribosomal protein S23-like; Belongs to the universal ribosomal protein uS12 family. (142 aa)
RPS1740S ribosomal protein S17. (233 aa)
RPS1940S ribosomal protein S19. (165 aa)
LOC102379089Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1127 aa)
RPS2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
RSAD1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (502 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1529 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (164 aa)
RPS240S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (239 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (382 aa)
LOC102373610Selenoprotein Pb-like. (261 aa)
RPS2840S ribosomal protein S28. (55 aa)
MRNIPMRN complex-interacting protein. (404 aa)
EIF4HEukaryotic translation initiation factor 4H. (239 aa)
RPS27L40S ribosomal protein S27. (89 aa)
RPS940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
RPS1440S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
RPS1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (193 aa)
EIF5Eukaryotic translation initiation factor 5. (429 aa)
RPS3A40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1. (315 aa)
EIF4A2Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family. (407 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
EIF3IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (329 aa)
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)
EIF3LEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (564 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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