11 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102382111	Microsomal triglyceride transfer protein-like isoform X1. (888 aa)
	PDIA2	Protein disulfide-isomerase A2. (533 aa)
	MTTP	Microsomal triglyceride transfer protein large subunit. (893 aa)
	SAR1A	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	APOB	Apolipoprotein B-100. (3654 aa)
	P4HB	Protein disulfide-isomerase. (427 aa)
	LOC102384651	Apolipoprotein B-100-like. (991 aa)
	APOE	Apolipoprotein E isoform X1. (252 aa)
	APOA4	Apolipoprotein A-IV isoform X1. (396 aa)
	SAR1B	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	LOC102387409	Apolipoprotein A-II-like. (103 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOA4	APOB	A0A1U8DBC9	A0A1U7SB35	Apolipoprotein A-IV isoform X1.	Apolipoprotein B-100.	0.581
APOA4	APOE	A0A1U8DBC9	A0A1U7SXQ0	Apolipoprotein A-IV isoform X1.	Apolipoprotein E isoform X1.	0.828
APOA4	LOC102384651	A0A1U8DBC9	A0A1U7SVD5	Apolipoprotein A-IV isoform X1.	Apolipoprotein B-100-like.	0.581
APOA4	LOC102387409	A0A1U8DBC9	A0A3Q0FWD5	Apolipoprotein A-IV isoform X1.	Apolipoprotein A-II-like.	0.833
APOA4	MTTP	A0A1U8DBC9	A0A1U7S102	Apolipoprotein A-IV isoform X1.	Microsomal triglyceride transfer protein large subunit.	0.415
APOB	APOA4	A0A1U7SB35	A0A1U8DBC9	Apolipoprotein B-100.	Apolipoprotein A-IV isoform X1.	0.581
APOB	APOE	A0A1U7SB35	A0A1U7SXQ0	Apolipoprotein B-100.	Apolipoprotein E isoform X1.	0.791
APOB	LOC102382111	A0A1U7SB35	A0A1U8DY45	Apolipoprotein B-100.	Microsomal triglyceride transfer protein-like isoform X1.	0.837
APOB	LOC102384651	A0A1U7SB35	A0A1U7SVD5	Apolipoprotein B-100.	Apolipoprotein B-100-like.	0.907
APOB	LOC102387409	A0A1U7SB35	A0A3Q0FWD5	Apolipoprotein B-100.	Apolipoprotein A-II-like.	0.831
APOB	MTTP	A0A1U7SB35	A0A1U7S102	Apolipoprotein B-100.	Microsomal triglyceride transfer protein large subunit.	0.896
APOB	P4HB	A0A1U7SB35	A0A1U7SUP7	Apolipoprotein B-100.	Protein disulfide-isomerase.	0.620
APOB	PDIA2	A0A1U7SB35	A0A1U7RBU9	Apolipoprotein B-100.	Protein disulfide-isomerase A2.	0.620
APOB	SAR1A	A0A1U7SB35	A0A1U7S285	Apolipoprotein B-100.	GTP-binding protein SAR1a; Belongs to the small GTPase superfamily. SAR1 family.	0.426
APOB	SAR1B	A0A1U7SB35	A0A1U8E068	Apolipoprotein B-100.	GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.	0.426
APOE	APOA4	A0A1U7SXQ0	A0A1U8DBC9	Apolipoprotein E isoform X1.	Apolipoprotein A-IV isoform X1.	0.828
APOE	APOB	A0A1U7SXQ0	A0A1U7SB35	Apolipoprotein E isoform X1.	Apolipoprotein B-100.	0.791
APOE	LOC102382111	A0A1U7SXQ0	A0A1U8DY45	Apolipoprotein E isoform X1.	Microsomal triglyceride transfer protein-like isoform X1.	0.408
APOE	LOC102384651	A0A1U7SXQ0	A0A1U7SVD5	Apolipoprotein E isoform X1.	Apolipoprotein B-100-like.	0.791
APOE	LOC102387409	A0A1U7SXQ0	A0A3Q0FWD5	Apolipoprotein E isoform X1.	Apolipoprotein A-II-like.	0.894