5 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102384651	Apolipoprotein B-100-like. (991 aa)
	APOB	Apolipoprotein B-100. (3654 aa)
	LIPC	Hepatic triacylglycerol lipase. (498 aa)
	LDLRAP1	Low density lipoprotein receptor adapter protein 1 isoform X1. (332 aa)
	APOE	Apolipoprotein E isoform X1. (252 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOB	APOE	A0A1U7SB35	A0A1U7SXQ0	Apolipoprotein B-100.	Apolipoprotein E isoform X1.	0.791
APOB	LDLRAP1	A0A1U7SB35	A0A1U7RUU8	Apolipoprotein B-100.	Low density lipoprotein receptor adapter protein 1 isoform X1.	0.701
APOB	LIPC	A0A1U7SB35	A0A1U8D805	Apolipoprotein B-100.	Hepatic triacylglycerol lipase.	0.782
APOB	LOC102384651	A0A1U7SB35	A0A1U7SVD5	Apolipoprotein B-100.	Apolipoprotein B-100-like.	0.907
APOE	APOB	A0A1U7SXQ0	A0A1U7SB35	Apolipoprotein E isoform X1.	Apolipoprotein B-100.	0.791
APOE	LIPC	A0A1U7SXQ0	A0A1U8D805	Apolipoprotein E isoform X1.	Hepatic triacylglycerol lipase.	0.467
APOE	LOC102384651	A0A1U7SXQ0	A0A1U7SVD5	Apolipoprotein E isoform X1.	Apolipoprotein B-100-like.	0.791
LDLRAP1	APOB	A0A1U7RUU8	A0A1U7SB35	Low density lipoprotein receptor adapter protein 1 isoform X1.	Apolipoprotein B-100.	0.701
LDLRAP1	LOC102384651	A0A1U7RUU8	A0A1U7SVD5	Low density lipoprotein receptor adapter protein 1 isoform X1.	Apolipoprotein B-100-like.	0.701
LIPC	APOB	A0A1U8D805	A0A1U7SB35	Hepatic triacylglycerol lipase.	Apolipoprotein B-100.	0.782
LIPC	APOE	A0A1U8D805	A0A1U7SXQ0	Hepatic triacylglycerol lipase.	Apolipoprotein E isoform X1.	0.467
LIPC	LOC102384651	A0A1U8D805	A0A1U7SVD5	Hepatic triacylglycerol lipase.	Apolipoprotein B-100-like.	0.782
LOC102384651	APOB	A0A1U7SVD5	A0A1U7SB35	Apolipoprotein B-100-like.	Apolipoprotein B-100.	0.907
LOC102384651	APOE	A0A1U7SVD5	A0A1U7SXQ0	Apolipoprotein B-100-like.	Apolipoprotein E isoform X1.	0.791
LOC102384651	LDLRAP1	A0A1U7SVD5	A0A1U7RUU8	Apolipoprotein B-100-like.	Low density lipoprotein receptor adapter protein 1 isoform X1.	0.701
LOC102384651	LIPC	A0A1U7SVD5	A0A1U8D805	Apolipoprotein B-100-like.	Hepatic triacylglycerol lipase.	0.782