42 items (Alligator sinensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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protein homology

Your Input:
	APOA1	Apolipoprotein A-I. (259 aa)
	LSR	Lipolysis-stimulated lipoprotein receptor. (527 aa)
	AP2M1	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family. (437 aa)
	LOC102384651	Apolipoprotein B-100-like. (991 aa)
	APOE	Apolipoprotein E isoform X1. (252 aa)
	LOC102378119	Arylacetamide deacetylase-like 4. (389 aa)
	LIPC	Hepatic triacylglycerol lipase. (498 aa)
	LOC102383324	Uncharacterized protein LOC102383324. (3867 aa)
	UBA52	ubiquitin-60S ribosomal protein L40. (104 aa)
	APOC1	Apolipoprotein C-I isoform X1. (273 aa)
	LOC102381531	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (957 aa)
	LOC112548659	Uncharacterized protein LOC112548659. (210 aa)
	AMN	Protein amnionless. (481 aa)
	SCARB1	Scavenger receptor class B member 1 isoform X1; Belongs to the CD36 family. (473 aa)
	NPC2	NPC intracellular cholesterol transporter 2 isoform X1. (150 aa)
	RPS27A	ubiquitin-40S ribosomal protein S27a. (156 aa)
	LOC102377163	Arylacetamide deacetylase-like 4. (403 aa)
	CLHC1	Clathrin heavy chain linker domain-containing protein 1 isoform X1. (626 aa)
	NR1H2	Oxysterols receptor LXR-beta isoform X1. (438 aa)
	UBC	polyubiquitin-C. (381 aa)
	LOC102377629	Arylacetamide deacetylase-like 4. (394 aa)
	LOC102378354	Arylacetamide deacetylase-like 4. (410 aa)
	ILDR2	LOW QUALITY PROTEIN: immunoglobulin-like domain-containing receptor 2. (634 aa)
	LDLRAP1	Low density lipoprotein receptor adapter protein 1 isoform X1. (332 aa)
	NCEH1	Neutral cholesterol ester hydrolase 1 isoform X1. (408 aa)
	LOC102371294	Vitellogenin-1-like. (1815 aa)
	CDCP2	CUB domain-containing protein 2. (523 aa)
	APOB	Apolipoprotein B-100. (3654 aa)
	AP2A1	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (969 aa)
	LOC102377871	Arylacetamide deacetylase-like 4. (358 aa)
	LOC102376680	Arylacetamide deacetylase-like 4 isoform X1. (401 aa)
	LOC102377402	LOW QUALITY PROTEIN: arylacetamide deacetylase-like 3. (241 aa)
	PCSK9	Proprotein convertase subtilisin/kexin type 9. (666 aa)
	MYLIP	E3 ubiquitin-protein ligase MYLIP. (380 aa)
	LOC102371686	Vitellogenin-2-like. (1753 aa)
	LOC102371934	Vitellogenin-2-like. (1805 aa)
	UBB	polyubiquitin-B. (233 aa)
	NR1H3	LOW QUALITY PROTEIN: oxysterols receptor LXR-alpha. (414 aa)
	CUBN	Cubilin isoform X1. (3632 aa)
	KXD1	kxDL motif-containing protein 1. (176 aa)
	HDLBP	Vigilin isoform X1. (1264 aa)
	AP2S1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMN	CDCP2	A0A3Q0G019	A0A1U7S7V9	Protein amnionless.	CUB domain-containing protein 2.	0.891
AMN	CUBN	A0A3Q0G019	A0A3Q0HPM9	Protein amnionless.	Cubilin isoform X1.	0.980
AP2A1	AP2M1	A0A3Q0G0P4	A0A3Q0G027	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	0.999
AP2A1	AP2S1	A0A3Q0G0P4	A0A1U7SIQ6	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
AP2A1	APOB	A0A3Q0G0P4	A0A1U7SB35	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	Apolipoprotein B-100.	0.444
AP2A1	CLHC1	A0A3Q0G0P4	A0A1U7RKC3	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	Clathrin heavy chain linker domain-containing protein 1 isoform X1.	0.805
AP2A1	LDLRAP1	A0A3Q0G0P4	A0A1U7RUU8	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	Low density lipoprotein receptor adapter protein 1 isoform X1.	0.657
AP2A1	LOC102381531	A0A3Q0G0P4	A0A3Q0FTF4	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.943
AP2A1	LOC102384651	A0A3Q0G0P4	A0A1U7SVD5	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	Apolipoprotein B-100-like.	0.444
AP2A1	RPS27A	A0A3Q0G0P4	A0A1U7RD94	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	ubiquitin-40S ribosomal protein S27a.	0.634
AP2A1	UBB	A0A3Q0G0P4	A0A3Q0HJE8	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	polyubiquitin-B.	0.602
AP2A1	UBC	A0A3Q0G0P4	A0A1U7RLK0	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	polyubiquitin-C.	0.602
AP2M1	AP2A1	A0A3Q0G027	A0A3Q0G0P4	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.999
AP2M1	AP2S1	A0A3Q0G027	A0A1U7SIQ6	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
AP2M1	APOB	A0A3Q0G027	A0A1U7SB35	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	Apolipoprotein B-100.	0.446
AP2M1	CLHC1	A0A3Q0G027	A0A1U7RKC3	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	Clathrin heavy chain linker domain-containing protein 1 isoform X1.	0.766
AP2M1	LDLRAP1	A0A3Q0G027	A0A1U7RUU8	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	Low density lipoprotein receptor adapter protein 1 isoform X1.	0.721
AP2M1	LOC102381531	A0A3Q0G027	A0A3Q0FTF4	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.998
AP2M1	LOC102384651	A0A3Q0G027	A0A1U7SVD5	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	Apolipoprotein B-100-like.	0.446
AP2M1	RPS27A	A0A3Q0G027	A0A1U7RD94	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	ubiquitin-40S ribosomal protein S27a.	0.654