STRINGSTRING
CLGN CLGN CALR3 CALR3 MARCH8 MARCH8 UGGT1 UGGT1 EDEM1 EDEM1 MARCH11 MARCH11 TRIM59 TRIM59 TRIM13 TRIM13 LOC102378524 LOC102378524 MARCH1 MARCH1 UGGT2 UGGT2 MARCH7 MARCH7 MARCH6 MARCH6 MARCH10 MARCH10 LOC102374453 LOC102374453 MARCH9 MARCH9 EDEM3 EDEM3 PDIA3 PDIA3 PDIA4 PDIA4 LOC102383381 LOC102383381 UBA52 UBA52 MARCH3 MARCH3 TRIM54 TRIM54 LOC112551795 LOC112551795 UBB UBB KXD1 KXD1 MARCH4 MARCH4 LOC102369313 LOC102369313 RNF139 RNF139 CANX CANX MAN1B1 MAN1B1 UBC UBC CALR CALR RPS27A RPS27A GANAB GANAB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CLGNCalmegin isoform X1. (638 aa)
CALR3Calreticulin. (442 aa)
MARCH8E3 ubiquitin-protein ligase MARCH8 isoform X1. (630 aa)
UGGT1UDP-glucose:glycoprotein glucosyltransferase 1 isoform X1. (1595 aa)
EDEM1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (457 aa)
MARCH11E3 ubiquitin-protein ligase MARCH11. (235 aa)
TRIM59Tripartite motif-containing protein 59 isoform X1. (423 aa)
TRIM13E3 ubiquitin-protein ligase TRIM13 isoform X1. (416 aa)
LOC102378524alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (594 aa)
MARCH1E3 ubiquitin-protein ligase MARCH1 isoform X1. (333 aa)
UGGT2UDP-glucose:glycoprotein glucosyltransferase 2 isoform X1. (1559 aa)
MARCH7LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MARCH7. (752 aa)
MARCH6E3 ubiquitin-protein ligase MARCH6. (983 aa)
MARCH10Probable E3 ubiquitin-protein ligase MARCH10. (769 aa)
LOC102374453Tripartite motif-containing protein 55-like isoform X1. (310 aa)
MARCH9E3 ubiquitin-protein ligase MARCH9. (254 aa)
EDEM3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (945 aa)
PDIA3Protein disulfide-isomerase. (566 aa)
PDIA4Protein disulfide-isomerase. (653 aa)
LOC102383381alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (795 aa)
UBA52ubiquitin-60S ribosomal protein L40. (104 aa)
MARCH3E3 ubiquitin-protein ligase MARCH3 isoform X1. (254 aa)
TRIM54Tripartite motif-containing protein 54. (280 aa)
LOC112551795E3 ubiquitin-protein ligase TRIM63. (356 aa)
UBBpolyubiquitin-B. (233 aa)
KXD1kxDL motif-containing protein 1. (176 aa)
MARCH4E3 ubiquitin-protein ligase MARCH4. (400 aa)
LOC102369313E3 ubiquitin-protein ligase RNF103 isoform X1. (608 aa)
RNF139E3 ubiquitin-protein ligase RNF139 isoform X1. (626 aa)
CANXLOW QUALITY PROTEIN: calnexin. (615 aa)
MAN1B1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (668 aa)
UBCpolyubiquitin-C. (381 aa)
CALRCalreticulin. (412 aa)
RPS27Aubiquitin-40S ribosomal protein S27a. (156 aa)
GANABNeutral alpha-glucosidase AB; Belongs to the glycosyl hydrolase 31 family. (859 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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