STRINGSTRING
LRP1B LRP1B PLB1 PLB1 LOC102384482 LOC102384482 RBP4 RBP4 GPC1 GPC1 BCO1 BCO1 HSPG2 HSPG2 SDC3 SDC3 AGRN AGRN LOC102387409 LOC102387409 LRP10 LRP10 LRP1 LRP1 APOM APOM GPC3 GPC3 BCO2 BCO2 LOC102383324 LOC102383324 APOA4 APOA4 GPC6 GPC6 APOE APOE LOC102384651 LOC102384651 APOA1 APOA1 SDC1 SDC1 LOC102377010 LOC102377010 LRP12 LRP12 RBP2 RBP2 APOB APOB GPC4 GPC4 LRAT LRAT SDC2 SDC2 RETSAT RETSAT CLPS CLPS GPC5 GPC5 TTR TTR LRP3 LRP3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LRP1BLow-density lipoprotein receptor-related protein 1B. (4577 aa)
PLB1Phospholipase B1, membrane-associated. (1353 aa)
LOC102384482Glypican-5-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (585 aa)
RBP4Retinol-binding protein 4; Belongs to the calycin superfamily. Lipocalin family. (179 aa)
GPC1Glypican-1 isoform X1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (529 aa)
BCO1Beta,beta-carotene 15,15'-dioxygenase. (513 aa)
HSPG2LOW QUALITY PROTEIN: basement membrane-specific heparan sulfate proteoglycan core protein. (4462 aa)
SDC3Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (427 aa)
AGRNAgrin. (1958 aa)
LOC102387409Apolipoprotein A-II-like. (103 aa)
LRP10Low-density lipoprotein receptor-related protein 10. (579 aa)
LRP1LOW QUALITY PROTEIN: prolow-density lipoprotein receptor-related protein 1. (4714 aa)
APOMApolipoprotein M. (184 aa)
GPC3Glypican-3 isoform X1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (596 aa)
BCO2Beta,beta-carotene 9',10'-oxygenase isoform X1. (564 aa)
LOC102383324Uncharacterized protein LOC102383324. (3867 aa)
APOA4Apolipoprotein A-IV isoform X1. (396 aa)
GPC6Glypican-6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (525 aa)
APOEApolipoprotein E isoform X1. (252 aa)
LOC102384651Apolipoprotein B-100-like. (991 aa)
APOA1Apolipoprotein A-I. (259 aa)
SDC1Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (311 aa)
LOC102377010Retinol-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (93 aa)
LRP12Low-density lipoprotein receptor-related protein 12. (831 aa)
RBP2Retinol-binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
APOBApolipoprotein B-100. (3654 aa)
GPC4Glypican-4 isoform X1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (601 aa)
LRATLecithin retinol acyltransferase. (175 aa)
SDC2Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (209 aa)
RETSATAll-trans-retinol 13,14-reductase isoform X1. (607 aa)
CLPSColipase. (112 aa)
GPC5Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (423 aa)
TTRTransthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (150 aa)
LRP3Low-density lipoprotein receptor-related protein 3. (829 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
Server load: medium (44%) [HD]