STRINGSTRING
CIITA CIITA LOC102388792 LOC102388792 LOC102388542 LOC102388542 LOC102372690 LOC102372690 LOC102387876 LOC102387876 NLRX1 NLRX1 LOC102370503 LOC102370503 NOD1 NOD1 NPHP3 NPHP3 LOC102382702 LOC102382702 LOC102369019 LOC102369019 LOC102378436 LOC102378436 LOC102383516 LOC102383516 LOC102374462 LOC102374462 NLRC3 NLRC3 LOC102381106 LOC102381106 LOC102381365 LOC102381365 LOC102372525 LOC102372525 LOC102380544 LOC102380544 LOC102378507 LOC102378507 LOC102372275 LOC102372275 LOC102383266 LOC102383266 LOC102384011 LOC102384011 NLRC4 NLRC4 LOC112550770 LOC112550770
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CIITALOW QUALITY PROTEIN: MHC class II transactivator. (1219 aa)
LOC102388792LOW QUALITY PROTEIN: baculoviral IAP repeat-containing protein 1-like. (843 aa)
LOC102388542LOW QUALITY PROTEIN: baculoviral IAP repeat-containing protein 1-like. (1367 aa)
LOC102372690NACHT, LRR and PYD domains-containing protein 3-like isoform X1. (1116 aa)
LOC102387876NACHT, LRR and PYD domains-containing protein 3-like. (1185 aa)
NLRX1NLR family member X1. (980 aa)
LOC102370503NACHT, LRR and PYD domains-containing protein 12-like isoform X1. (896 aa)
NOD1Nucleotide-binding oligomerization domain-containing protein 1 isoform X1. (951 aa)
NPHP3Nephrocystin-3 isoform X1. (1316 aa)
LOC102382702NACHT, LRR and PYD domains-containing protein 3-like. (393 aa)
LOC102369019NACHT, LRR and PYD domains-containing protein 12-like. (872 aa)
LOC102378436Uncharacterized protein LOC102378436. (734 aa)
LOC102383516LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like. (473 aa)
LOC102374462NACHT, LRR and PYD domains-containing protein 12-like. (233 aa)
NLRC3NLR family CARD domain-containing protein 3. (1093 aa)
LOC102381106NACHT, LRR and PYD domains-containing protein 12-like. (1039 aa)
LOC102381365LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like. (963 aa)
LOC102372525NACHT, LRR and PYD domains-containing protein 12-like. (890 aa)
LOC102380544NACHT, LRR and PYD domains-containing protein 3-like. (555 aa)
LOC102378507NACHT, LRR and PYD domains-containing protein 3-like isoform X1. (894 aa)
LOC102372275LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like. (613 aa)
LOC102383266NACHT, LRR and PYD domains-containing protein 3-like. (960 aa)
LOC102384011NACHT, LRR and PYD domains-containing protein 3-like. (609 aa)
NLRC4NLR family CARD domain-containing protein 4 isoform X1. (1030 aa)
LOC112550770Uncharacterized protein LOC112550770. (2068 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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