40 items (Alligator sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PLXNA4	plexin-A4. (1451 aa)
	SEMA4D	semaphorin-4D isoform X1; Belongs to the semaphorin family. (856 aa)
	SEMA3C	semaphorin-3C; Belongs to the semaphorin family. (751 aa)
	PLXNA1	LOW QUALITY PROTEIN: plexin-A1. (1883 aa)
	SEMA3F	semaphorin-3F isoform X1; Belongs to the semaphorin family. (798 aa)
	SEMA7A	semaphorin-7A; Belongs to the semaphorin family. (630 aa)
	PLXDC1	Plexin domain-containing protein 1 isoform X1. (494 aa)
	SEMA3A	semaphorin-3A; Belongs to the semaphorin family. (771 aa)
	SEMA6A	semaphorin-6A isoform X1; Belongs to the semaphorin family. (1041 aa)
	ATRNL1	Attractin-like protein 1. (1108 aa)
	SEMA3D	semaphorin-3D; Belongs to the semaphorin family. (793 aa)
	SEMA6C	LOW QUALITY PROTEIN: semaphorin-6C; Belongs to the semaphorin family. (1031 aa)
	SEMA4B	semaphorin-4B isoform X1; Belongs to the semaphorin family. (811 aa)
	SEMA5B	LOW QUALITY PROTEIN: semaphorin-5B. (1006 aa)
	SEMA5A	semaphorin-5A. (1077 aa)
	MST1R	Macrophage-stimulating protein receptor isoform X1. (1396 aa)
	PLXNB2	plexin-B2 isoform X1. (1839 aa)
	PTTG1IP	Pituitary tumor-transforming gene 1 protein-interacting protein. (142 aa)
	LOC102367907	semaphorin-7A-like; Belongs to the semaphorin family. (629 aa)
	PLXNB1	plexin-B1 isoform X1. (2204 aa)
	SEMA4F	LOW QUALITY PROTEIN: semaphorin-4F; Belongs to the semaphorin family. (772 aa)
	MEGF8	LOW QUALITY PROTEIN: multiple epidermal growth factor-like domains protein 8. (2558 aa)
	LOC102376089	semaphorin-4A isoform X1; Belongs to the semaphorin family. (882 aa)
	SEMA6B	semaphorin-6B; Belongs to the semaphorin family. (909 aa)
	ATRN	Attractin. (1283 aa)
	PLXDC2	Plexin domain-containing protein 2 isoform X1. (512 aa)
	SEMA4G	LOW QUALITY PROTEIN: semaphorin-4G; Belongs to the semaphorin family. (643 aa)
	SEMA3E	semaphorin-3E; Belongs to the semaphorin family. (774 aa)
	SEMA3B	semaphorin-3B isoform X1; Belongs to the semaphorin family. (811 aa)
	MET	Hepatocyte growth factor receptor isoform X1. (1384 aa)
	PLXND1	plexin-D1. (1534 aa)
	PLXNC1	plexin-C1. (1155 aa)
	LOC106721794	semaphorin-4D-like; Belongs to the semaphorin family. (576 aa)
	SEMA3G	semaphorin-3G isoform X1; Belongs to the semaphorin family. (779 aa)
	PLXNA3	plexin-A3. (1920 aa)
	SEMA6D	semaphorin-6D; Belongs to the semaphorin family. (1088 aa)
	SEMA4C	semaphorin-4C; Belongs to the semaphorin family. (837 aa)
	PLXNA2	LOW QUALITY PROTEIN: plexin-A2. (1892 aa)
	LOC102378884	semaphorin-3D-like; Belongs to the semaphorin family. (827 aa)
	PLXNB3	plexin-B3 isoform X1. (1833 aa)

Your Current Organism:

Alligator sinensis

NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102367907	MET	A0A3Q0FKX7	A0A3Q0GP31	semaphorin-7A-like; Belongs to the semaphorin family.	Hepatocyte growth factor receptor isoform X1.	0.633
LOC102367907	MST1R	A0A3Q0FKX7	A0A1U8D6R5	semaphorin-7A-like; Belongs to the semaphorin family.	Macrophage-stimulating protein receptor isoform X1.	0.633
LOC102367907	PLXNA1	A0A3Q0FKX7	A0A1U7RP60	semaphorin-7A-like; Belongs to the semaphorin family.	LOW QUALITY PROTEIN: plexin-A1.	0.557
LOC102367907	PLXNA2	A0A3Q0FKX7	A0A3Q0HE26	semaphorin-7A-like; Belongs to the semaphorin family.	LOW QUALITY PROTEIN: plexin-A2.	0.557
LOC102367907	PLXNA3	A0A3Q0FKX7	A0A3Q0H3G8	semaphorin-7A-like; Belongs to the semaphorin family.	plexin-A3.	0.557
LOC102367907	PLXNA4	A0A3Q0FKX7	A0A1U7RLB2	semaphorin-7A-like; Belongs to the semaphorin family.	plexin-A4.	0.557
LOC102367907	PLXNB1	A0A3Q0FKX7	A0A3Q0FNA2	semaphorin-7A-like; Belongs to the semaphorin family.	plexin-B1 isoform X1.	0.510
LOC102367907	PLXNB2	A0A3Q0FKX7	A0A1U8D9U9	semaphorin-7A-like; Belongs to the semaphorin family.	plexin-B2 isoform X1.	0.510
LOC102367907	PLXNB3	A0A3Q0FKX7	A0A3Q0HG31	semaphorin-7A-like; Belongs to the semaphorin family.	plexin-B3 isoform X1.	0.510
LOC102367907	PLXNC1	A0A3Q0FKX7	A0A3Q0H0G1	semaphorin-7A-like; Belongs to the semaphorin family.	plexin-C1.	0.946
LOC102367907	PLXND1	A0A3Q0FKX7	A0A3Q0GQW3	semaphorin-7A-like; Belongs to the semaphorin family.	plexin-D1.	0.620
LOC102376089	MET	A0A3Q0FT60	A0A3Q0GP31	semaphorin-4A isoform X1; Belongs to the semaphorin family.	Hepatocyte growth factor receptor isoform X1.	0.633
LOC102376089	MST1R	A0A3Q0FT60	A0A1U8D6R5	semaphorin-4A isoform X1; Belongs to the semaphorin family.	Macrophage-stimulating protein receptor isoform X1.	0.633
LOC102376089	PLXNA1	A0A3Q0FT60	A0A1U7RP60	semaphorin-4A isoform X1; Belongs to the semaphorin family.	LOW QUALITY PROTEIN: plexin-A1.	0.480
LOC102376089	PLXNA2	A0A3Q0FT60	A0A3Q0HE26	semaphorin-4A isoform X1; Belongs to the semaphorin family.	LOW QUALITY PROTEIN: plexin-A2.	0.480
LOC102376089	PLXNA3	A0A3Q0FT60	A0A3Q0H3G8	semaphorin-4A isoform X1; Belongs to the semaphorin family.	plexin-A3.	0.480
LOC102376089	PLXNA4	A0A3Q0FT60	A0A1U7RLB2	semaphorin-4A isoform X1; Belongs to the semaphorin family.	plexin-A4.	0.480
LOC102376089	PLXNB1	A0A3Q0FT60	A0A3Q0FNA2	semaphorin-4A isoform X1; Belongs to the semaphorin family.	plexin-B1 isoform X1.	0.514
LOC102376089	PLXNB2	A0A3Q0FT60	A0A1U8D9U9	semaphorin-4A isoform X1; Belongs to the semaphorin family.	plexin-B2 isoform X1.	0.514
LOC102376089	PLXNB3	A0A3Q0FT60	A0A3Q0HG31	semaphorin-4A isoform X1; Belongs to the semaphorin family.	plexin-B3 isoform X1.	0.514