STRINGSTRING
CNGA1 CNGA1 PDE6B PDE6B GRK7 GRK7 GUCA1A GUCA1A RCVRN RCVRN CALM3 CALM3 PDE6G PDE6G LOC102369688 LOC102369688 GNAT2 GNAT2 GUCA1B GUCA1B CALML4 CALML4 GRK1 GRK1 RHO RHO SLC24A1 SLC24A1 GUCY2F GUCY2F CALM1 CALM1 LOC102378112 LOC102378112 GUCY2D GUCY2D RGS9 RGS9 CNGB1 CNGB1 GNAT1 GNAT1 SAG SAG CALML6 CALML6 GNB1 GNB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNGA1cGMP-gated cation channel alpha-1. (650 aa)
PDE6BPhosphodiesterase. (834 aa)
GRK7G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (542 aa)
GUCA1AGuanylyl cyclase-activating protein 1. (198 aa)
RCVRNRecoverin. (192 aa)
CALM3Calmodulin-3; Belongs to the calmodulin family. (144 aa)
PDE6GRetinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma. (90 aa)
LOC102369688Calmodulin-alpha-like; Belongs to the calmodulin family. (149 aa)
GNAT2Guanine nucleotide-binding protein G(T) subunit alpha-2. (354 aa)
GUCA1BGuanylyl cyclase-activating protein 2. (200 aa)
CALML4Calmodulin-like protein 4 isoform X1. (152 aa)
GRK1G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (546 aa)
RHORhodopsin. (355 aa)
SLC24A1Sodium/potassium/calcium exchanger 1 isoform X1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (720 aa)
GUCY2FGuanylate cyclase. (1281 aa)
CALM1Calmodulin-1; Belongs to the calmodulin family. (113 aa)
LOC102378112Guanylyl cyclase-activating protein 2-like isoform X1. (214 aa)
GUCY2DGuanylate cyclase. (1251 aa)
RGS9Regulator of G-protein signaling 9 isoform X1. (690 aa)
CNGB1Cyclic nucleotide-gated cation channel beta-1 isoform X6. (1378 aa)
GNAT1Guanine nucleotide-binding protein G(T) subunit alpha-1 isoform X1. (493 aa)
SAGS-arrestin isoform X3. (399 aa)
CALML6Calmodulin-like protein 6 isoform X1. (190 aa)
GNB1Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1. (340 aa)
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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