STRINGSTRING
ECs1244 ECs1244 ECs1245 ECs1245 ECs1246 ECs1246 ECs1247 ECs1247 ECs1248 ECs1248 ECs1249 ECs1249 ECs1250 ECs1250 ECs1251 ECs1251 ECs2267 ECs2267 ECs2268 ECs2268 ECs2269 ECs2269 ECs4356 ECs4356 ECs4357 ECs4357 ECs4361 ECs4361 ECs4362 ECs4362 ECs4363 ECs4363
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ECs1244Unknown,identical to hypothetical protein [Bacteriophage 933W] gi|9632540|ref|NP_049534.1| percent identity 100 in 114 aa,similar to hypothetical proteins e.g. ygiW protein precursor [Escherichia coli] gi|1723887|sp|P52083|YGIW_ECOLI percent identity. (114 aa)
ECs1245MokW protein (prophage maintenance; modulation of host cell killing),identical to MokW [Bacteriophage 933W] gi|4585453|gb|AAD25481.1|AF125520_76 percent identity 100 in 70 aa, also similar to GelF [Escherichia coli] gi|1786200|gb|AAC73129.1| percent. (70 aa)
ECs1246Unknown,identical to hypothetical protein [Bacteriophage 933W] gi|4585454|gb|AAD25482.1|AF125520_77 but different start. (131 aa)
ECs1247Unknown,identical to hypothetical protein [Bacteriophage VT2-Sa] gi|5881668|dbj|BAA84359.1| percent identity 100 in 219 aa,identical to C-terminal part of hypothetical protein [Bacteriophage 933W] gi|4585455|gb|AAD25483.1|AF125520_78 percent identity. (219 aa)
ECs1248Unknown,identical to hypothetical protein [Bacteriophage VT2-Sa] gi|5881669|dbj|BAA84360.1| but different start,similar to hypothetical protein [Bacteriophage 933W] gi|7649907|dbj|BAA94185.1| percent identity 92 in 72 aa,also similar to hypothetical. (72 aa)
ECs1249Unknown,identical to hypothetical protein [Bacteriophage VT2-Sa] gi|5881670|dbj|BAA84361.1| percent identity 100 in 94 aa,GTG start. (94 aa)
ECs1250C4-type zinc finger protein (TraR family); Unknown,identical to hypothetical protein [Bacteriophage VT2-Sa] gi|5881671|dbj|BAA84362.1| percent identity 100 in 73 aa,similar to C4-type zinc finger proteins (TraR family) e.g. orf39 [Pseudomonas aeruginosa phage phi CTX] gi|4063813|dbj|BAA36267. (73 aa)
ECs1251Also similar to putative phage anti-repressor proteins e.g. [Neisseria meningitidis] gi|7379969|emb|CAB84545.1| percent identity 49 in 112 aa; identical to hypothetical protein [Bacteriophage VT2-Sa] gi|5881672|dbj|BAA84363.1| percent identity 100 in 209 aa; probable anti-repressor protein; similar to hypothetical proteins HI1422 [Haemophilus influenzae Rd] gi|1175795|sp|P44193|YE22_HAEIN percent identity 40 in 158 aa. (209 aa)
ECs2267Probable antitermination protein,similar to antitermination Q proteins e.g. [Bacteriophage 82] gi|132277|sp|P13870|REGQ_BP82 percent identity 75 in 229 aa. (229 aa)
ECs2268Probable crossover junction endodeoxyribonuclease,similar to Gp67 [Bacteriophage HK97] gi|6901639|gb|AAF31142.1| percent identity 64 in 114 aa,also similar to crossover junction endodeoxyribonucleases Rus (Holliday junction nuclease) (Holliday juncti. (119 aa)
ECs2269Hypothetical protein; Similar to B1560_ECOLI gi|1787843 percent identity 83 in 348 aa, GTG start. (349 aa)
ECs4356HicB-like protein; Unknown,similar to HicB-related protein [Xylella fastidiosa] gi|9106728|gb|AAF84477.1|AE003992_13 percent identity 35 in 110 aa, also similar to HicB [Haemophilus influenzae] gi|3603326|gb|AAC35810.1| percent identity 26 in 93 aa. (119 aa)
ECs4357HicA-like protein; Unknown,similar to HicA [Haemophilus influenzae] gi|3603325|gb|AAC35809.1| percent identity 30 in 60 aa. (91 aa)
ECs4361Hypothetical protein; Similar to YHIJ_ECOLI gi|1789902 percent identity 96 in 540 aa (Conserved in E.coli K-12). (540 aa)
ECs4362Hypothetical protein; N-terminal part (1-397 in 536 aa) is similar to YHIL_ECOLI gi|2367233 percent identity 87 in 397 aa, C-terminal part (413-536 in 536 aa) is similar to YHIK_ECOLI gi|1789903 percent identity 74 in 124 aa. (536 aa)
ECs4363Hypothetical protein; Similar to YHIM_ECOLI gi|1789905 percent identity 99 in 383 aa (Conserved in E.coli K-12). (383 aa)
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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