STRINGSTRING
ECs0626 ECs0626 ECs1048 ECs1048 ECs2553 ECs2553 ECs2934 ECs2934 ECs4086 ECs4086
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ECs0626Ferric enterobactin (enterochelin) transport; Similar to FEPE_ECOLI gi|1786802 percent identity 98 in 377 aa (Conserved in E.coli K-12). (377 aa)
ECs1048Hypothetical protein; Similar to B0964_ECOLI gi|1787198 percent identity 100 in 220 aa (Conserved in E.coli K-12). (220 aa)
ECs2553Hypothetical protein; Similar to B1843_ECOLI gi|1788148 percent identity 99 in 218 aa (Conserved in E.coli K-12). (218 aa)
ECs2934Hypothetical protein; Similar to YEHR_ECOLI gi|1788442 percent identity 100 in 157 aa (Conserved in E.coli K-12). (157 aa)
ECs4086Hypothetical protein; Similar to YRBL_ECOLI gi|1789600 percent identity 99 in 210 aa (Conserved in E.coli K-12). (210 aa)
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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